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B_1_S1_Biohub_coassembly_k141_4634922

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4634922_1
unknown

Not on your lists

107..700
DNA (594bp) protein (198aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_2
unknown

Not on your lists

comp(782..1942)
DNA (1161bp) protein (387aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_3
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1939..3237)
DNA (1299bp) protein (433aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH58_SINAD
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
B_1_S1_Biohub_coassembly_k141_4634922_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3263..4582)
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH58_SINAD
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
B_1_S1_Biohub_coassembly_k141_4634922_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(4815..6215)
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000382E19F
protoporphyrinogen IX and coproporphyrinogen III oxidase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
B_1_S1_Biohub_coassembly_k141_4634922_6
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(6220..7224)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4G RepID=UPI0003732D8D
ferrochelatase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
B_1_S1_Biohub_coassembly_k141_4634922_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(7226..8278)
DNA (1053bp) protein (351aa)
Uroporphyrinogen decarboxylase bin=GWA2_OP3_52_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
B_1_S1_Biohub_coassembly_k141_4634922_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8275..8910)
DNA (636bp) protein (212aa)
carboxymuconolactone decarboxylase bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Carboxymuconolactone decarboxylase
Tax=RBG_16_Nitrospirae_64_22_curated
B_1_S1_Biohub_coassembly_k141_4634922_9
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

9215..9760
DNA (546bp) protein (182aa)
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19)
Probable pyruvoyl-dependent arginine decarboxylase bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
B_1_S1_Biohub_coassembly_k141_4634922_10
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

9757..10635
DNA (879bp) protein (293aa)
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
agmatinase (EC:3.5.3.11)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_4634922_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10811..11617
DNA (807bp) protein (269aa)
MEMO1 family protein Acid345_3359 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL90_KORVE
hypothetical protein
MEMO1 family protein Acid345_3359 {ECO:0000256|HAMAP-Rule:MF_00055}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
B_1_S1_Biohub_coassembly_k141_4634922_12
unknown

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comp(11763..11852)
DNA (90bp) protein (30aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_13
unknown

Not on your lists

comp(12068..13144)
DNA (1077bp) protein (359aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_14
unknown

Not on your lists

comp(13171..14037)
DNA (867bp) protein (289aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14206..16044)
DNA (1839bp) protein (613aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBX4_SINAD
glucose-inhibited division protein A
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_4634922_16
unknown

Not on your lists

comp(16217..16657)
DNA (441bp) protein (147aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4634922_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16813..17721
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8K0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17222.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
polyphosphate-dependent ADP kinase
B_1_S1_Biohub_coassembly_k141_4634922_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(17738..18022)
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
B_1_S1_Biohub_coassembly_k141_4634922_19
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18136..18375)
DNA (240bp) protein (80aa)
transcriptional regulator, AbrB family protein bin=GWF2_Lentisphaerae_38_69 species=Rickettsia endosymbiont of Ixodes scapularis genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
AbrB family transcriptional regulator
Tax=GWF2_Lentisphaerae_38_69_curated
B_1_S1_Biohub_coassembly_k141_4634922_20
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18456..19802)
DNA (1347bp) protein (449aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
Glycine--tRNA ligase Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PTW4_9FIRM
glycyl-tRNA synthetase
B_1_S1_Biohub_coassembly_k141_4634922_21
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(19889..20248)
DNA (360bp) protein (120aa)
Uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_4634922_22
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(20245..20676)
DNA (432bp) protein (144aa)
Tax=RBG_16_Planctomycetes_59_8_curated
Displaying 22 items

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