ggKbase home page

B_1_S1_Biohub_coassembly_k141_4898114

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4898114_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..364)
DNA (363bp) protein (121aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00035E6E5C
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
B_1_S1_Biohub_coassembly_k141_4898114_2
unknown

Not on your lists

comp(495..1817)
DNA (1323bp) protein (441aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4898114_3
unknown

Not on your lists

comp(1917..2597)
DNA (681bp) protein (227aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4898114_4
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(2594..4129)
DNA (1536bp) protein (512aa)
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NDV6_GLOVI bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter permease
Tax=RBG_16_NC10_65_8_curated
B_1_S1_Biohub_coassembly_k141_4898114_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(4403..5314)
DNA (912bp) protein (304aa)
Peptidase M28 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aminopeptidase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
B_1_S1_Biohub_coassembly_k141_4898114_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5468..7075)
DNA (1608bp) protein (536aa)
spermine synthase bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
spermine synthase
Tax=CSP1_3_Armatimonadetes
B_1_S1_Biohub_coassembly_k141_4898114_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7216..8580)
DNA (1365bp) protein (455aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Natronorubrum tibetense GA33 RepID=L9VH00_9EURY
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ELY36247.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
hydratase
B_1_S1_Biohub_coassembly_k141_4898114_8
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8617..8868
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8FDZ0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK06033.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4898114_9
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8865..9263
DNA (399bp) protein (133aa)
Toxin-antitoxin system, toxin component, PIN family Tax=delta proteobacterium NaphS2 RepID=D8FDZ1_9DELT
Toxin-antitoxin system, toxin component, PIN family {ECO:0000313|EMBL:EFK06000.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
PilT protein domain protein
B_1_S1_Biohub_coassembly_k141_4898114_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

9329..10495
DNA (1167bp) protein (389aa)
Histidine kinase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL21_SYNFM
histidine kinase
Tax=RBG_16_Zixibacteria_53_22_curated
B_1_S1_Biohub_coassembly_k141_4898114_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

10492..11853
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZE6_DESML
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_Zixibacteria_43_9_curated
B_1_S1_Biohub_coassembly_k141_4898114_12
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

12067..12342
DNA (276bp) protein (92aa)
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
B_1_S1_Biohub_coassembly_k141_4898114_13
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

12344..13675
DNA (1332bp) protein (444aa)
Glutamate dehydrogenase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYX9_CALAS
putative glutamate dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
B_1_S1_Biohub_coassembly_k141_4898114_14
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13808..15160)
DNA (1353bp) protein (451aa)
von Willebrand factor, type A domain protein Tax=Rhodopirellula sallentina SM41 RepID=M5U934_9PLAN
von Willebrand factor, type A domain protein {ECO:0000313|EMBL:EMI52488.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
HEAT repeat-containing protein
Displaying 14 items

View Taxonomy