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B_1_S1_Biohub_coassembly_k141_5519746

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5519746_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(139..1020)
DNA (882bp) protein (294aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protoheme IX farnesyltransferase
Tax=CSP1_5_NC10
B_1_S1_Biohub_coassembly_k141_5519746_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1017..1901)
DNA (885bp) protein (295aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4DFC2
Uncharacterized protein {ECO:0000313|EMBL:ETX06487.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Cytochrome oxidase assembly
B_1_S1_Biohub_coassembly_k141_5519746_3
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(1905..3701)
DNA (1797bp) protein (599aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
cytochrome C oxidase
Tax=GWA2_OP3_52_8_curated
B_1_S1_Biohub_coassembly_k141_5519746_4
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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comp(3701..4807)
DNA (1107bp) protein (369aa)
Putative cytochrome c oxidase, subunit II bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
B_1_S1_Biohub_coassembly_k141_5519746_5
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(4930..5928)
DNA (999bp) protein (333aa)
Putative membrane protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRE9_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
B_1_S1_Biohub_coassembly_k141_5519746_6
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(5925..6674)
DNA (750bp) protein (250aa)
Probable membrane protein Tax=Planctomyces maris DSM 8797 RepID=A6C0L7_9PLAN
ABC transporter permease
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
B_1_S1_Biohub_coassembly_k141_5519746_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(6671..7594)
DNA (924bp) protein (308aa)
Daunorubicin resistance ABC transporter ATPase subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPH9_KORVE
daunorubicin resistance ABC transporter ATPase subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
B_1_S1_Biohub_coassembly_k141_5519746_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7739..8560)
DNA (822bp) protein (274aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85345.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
B_1_S1_Biohub_coassembly_k141_5519746_9
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(8585..11773)
DNA (3189bp) protein (1063aa)
Putative cytochrome-related protein bin=GWA2_OP3_53_43 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
putative cytochrome-related protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
B_1_S1_Biohub_coassembly_k141_5519746_10
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(11793..12893)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBZ4_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
B_1_S1_Biohub_coassembly_k141_5519746_11
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(12910..13746)
DNA (837bp) protein (279aa)
cytochrome B6 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5A8B0
putative ubiquinol-cytochrome C reductase cytochrome B subunit
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_5519746_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(13762..14682)
DNA (921bp) protein (307aa)
Rieske (2Fe-2S) domain-containing protein Tax=Schlesneria paludicola RepID=UPI00029B2559
Rieske Fe-S protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
B_1_S1_Biohub_coassembly_k141_5519746_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14698..15666)
DNA (969bp) protein (323aa)
HEAT repeat-containing PBS lyase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP54_CORCM
HEAT repeat-containing PBS lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
B_1_S1_Biohub_coassembly_k141_5519746_14
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15839..17167)
DNA (1329bp) protein (443aa)
Sigma-54-dependent transcriptional regulator bin=GWA2_OP3_52_12 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Fis family transcriptional regulator
Sigma-54 dependent transcriptional regulator/response regulator {ECO:0000313|EMBL:ABB15526.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
B_1_S1_Biohub_coassembly_k141_5519746_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17164..17556)
DNA (393bp) protein (131aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Histidine kinase,histidine kinase Tax=Desulfovibrio sp. U5L RepID=I2Q4Z3_9DELT
two-component sensor histidine kinase
Displaying 15 items

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