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B_1_S1_Biohub_coassembly_k141_3044314

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3044314_1
unknown

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81..533
DNA (453bp) protein (151aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3044314_2
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(721..1848)
DNA (1128bp) protein (376aa)
O-sialoglycoprotein endopeptidase, O-sialoglycoprotein endopeptidase {ECO:0000313|EMBL:KKU98684.1}; EC=3.4.24.57 {ECO:0000313|EMBL:KKU98684.1};; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
B_1_S1_Biohub_coassembly_k141_3044314_3
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(1908..2156)
DNA (249bp) protein (83aa)
ATP synthase F1, epsilon subunit; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
atpC; ATP synthase F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain {ECO:0000313|EMBL:KKW48250.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
B_1_S1_Biohub_coassembly_k141_3044314_4
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

comp(2173..3612)
DNA (1440bp) protein (480aa)
ATP synthase subunit beta Tax=uncultured bacterium RepID=K2FZ07_9BACT
atpD; F0F1 ATP synthase subunit beta
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
B_1_S1_Biohub_coassembly_k141_3044314_5
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(3661..4641)
DNA (981bp) protein (327aa)
ATP synthase gamma chain {ECO:0000313|EMBL:KKW48252.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
ATP synthase gamma chain bin=GWA1_ZB2_49_26 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ATP synthase F1 subcomplex subunit gamma
B_1_S1_Biohub_coassembly_k141_3044314_6
GWA1_OD1_59_11, Parcubacteria, Bacteria

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comp(4760..6337)
DNA (1578bp) protein (526aa)
ttr:Tter_0065 ATP synthase F1, alpha subunit (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
atpA; F0F1-type ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000313|EMBL:KKW48253.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
B_1_S1_Biohub_coassembly_k141_3044314_7
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

comp(6402..6803)
DNA (402bp) protein (134aa)
Tax=RIFOXYD1_FULL_OD1_48_21_curated
B_1_S1_Biohub_coassembly_k141_3044314_8
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(6800..7300)
DNA (501bp) protein (167aa)
ATP synthase subunit b {ECO:0000313|EMBL:KKW48255.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ATP synthase F0F1 subunit B
B_1_S1_Biohub_coassembly_k141_3044314_9
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(7395..7619)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ETS2_9BACT
ATP synthase subunit c {ECO:0000313|EMBL:KKW48256.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
atpE; ATP synthase subunit c
B_1_S1_Biohub_coassembly_k141_3044314_10
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(7762..8571)
DNA (810bp) protein (270aa)
ATP synthase F0, A subunit; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] alias= bin=GWC1_CPR2_39_9 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ATP synthase F0 subunit A
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
B_1_S1_Biohub_coassembly_k141_3044314_11
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8746..8976
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
B_1_S1_Biohub_coassembly_k141_3044314_trna_1
unknown

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comp(9155..9226)
DNA (72bp)
transferRNA Glu
B_1_S1_Biohub_coassembly_k141_3044314_12
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

9495..9902
DNA (408bp) protein (136aa)
DoxX family protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
B_1_S1_Biohub_coassembly_k141_3044314_13
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

10032..11711
DNA (1680bp) protein (560aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46860.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
conserved membrane protein of unknown function bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3044314_14
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

11737..12597
DNA (861bp) protein (287aa)
Cell wall surface anchor family protein Tax=uncultured bacterium RepID=K1XFN5_9BACT
carbohydrate-binding family V/XII
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
B_1_S1_Biohub_coassembly_k141_3044314_15
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

12813..13391
DNA (579bp) protein (193aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000372B08E
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
B_1_S1_Biohub_coassembly_k141_3044314_16
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

13492..14058
DNA (567bp) protein (189aa)
transmembrane_regions 7..29 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_3044314_17
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14393..14953
DNA (561bp) protein (187aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_3044314_18
unknown

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15194..15325
DNA (132bp) protein (44aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3044314_19
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

15468..17702
DNA (2235bp) protein (745aa)
hypothetical protein bin=OD1_GWC2_34_28 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
Displaying 20 items

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