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B_1_S1_Biohub_coassembly_k141_4676334

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4676334_16S_1
unknown

Not on your lists

comp(2..763)
DNA (762bp)
16S ribosomal RNA (16S rRNA)
B_1_S1_Biohub_coassembly_k141_4676334_1
unknown

Not on your lists

621..776
DNA (156bp) protein (52aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4676334_2
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

1044..2108
DNA (1065bp) protein (355aa)
Gll3938 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEE2_GLOVI
hypothetical protein
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
B_1_S1_Biohub_coassembly_k141_4676334_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2109..3197)
DNA (1089bp) protein (363aa)
Putative oxidoreductase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4Q1_CALAS
putative oxidoreductase
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_4676334_4
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3270..4229)
DNA (960bp) protein (320aa)
Glycosyl transferase family 2 family protein Tax=Rhodococcus sp. JVH1 RepID=J1QZJ7_9NOCA
Glycosyl transferase family 2 family protein {ECO:0000313|EMBL:EJI97168.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
B_1_S1_Biohub_coassembly_k141_4676334_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4456..5226
DNA (771bp) protein (257aa)
transcriptional regulator TrmB Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B652B8
transcriptional regulator TrmB
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
B_1_S1_Biohub_coassembly_k141_4676334_6
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(5238..5984)
DNA (747bp) protein (249aa)
N-acetylglucosamine-1-phosphate uridyltransferase Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B334D4
bifunctional protein glmU
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
B_1_S1_Biohub_coassembly_k141_4676334_7
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

6149..6397
DNA (249bp) protein (83aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003649896
rpmE; 50S ribosomal protein L31
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
B_1_S1_Biohub_coassembly_k141_4676334_8
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(6435..8030)
DNA (1596bp) protein (532aa)
Two-component sensor histidine kinase Tax=uncultured bacterium RepID=K2BIY9_9BACT
two-component sensor histidine kinase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
B_1_S1_Biohub_coassembly_k141_4676334_9
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8050..8919)
DNA (870bp) protein (290aa)
Alpha/beta hydrolase fold protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U301_9CYAN
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
B_1_S1_Biohub_coassembly_k141_4676334_10
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8916..10007)
DNA (1092bp) protein (364aa)
UBA/THIF-type NAD/FAD binding protein Tax=Pedobacter saltans DSM 12145 RepID=F0SCP1_PEDSD bin=ACD52 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
UBA/THIF-type NAD/FAD binding protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
B_1_S1_Biohub_coassembly_k141_4676334_11
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(10016..11569)
DNA (1554bp) protein (518aa)
afw:Anae109_4063 putative phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
B_1_S1_Biohub_coassembly_k141_4676334_12
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11566..12609)
DNA (1044bp) protein (348aa)
leucine dehydrogenase (EC:1.4.1.9)
Leucine dehydrogenase bin=GWC1_OD1_38_17 species=Erythrobacter sp. SD-21 genus=Erythrobacter taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
B_1_S1_Biohub_coassembly_k141_4676334_13
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12614..13624)
DNA (1011bp) protein (337aa)
hypothetical protein bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
nitroreductase
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
B_1_S1_Biohub_coassembly_k141_4676334_14
unknown

Not on your lists

comp(13650..14066)
DNA (417bp) protein (139aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4676334_15
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(14083..14472)
DNA (390bp) protein (130aa)
two-component response regulator; K10697 two-component system, OmpR family, response regulator RpaA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_4676334_16
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

14522..15319
DNA (798bp) protein (266aa)
Peptide chain release factor 1 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
prfA; protein chain release factor A
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
B_1_S1_Biohub_coassembly_k141_4676334_17
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists

15341..15799
DNA (459bp) protein (153aa)
MutT/NUDIX family protein bin=GWD2_CPR2_39_7 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
MutT/nudix family protein {ECO:0000313|EMBL:KKS09881.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4676334_18
unknown

Not on your lists

15951..16178
DNA (228bp) protein (76aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4676334_19
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(16214..17287)
DNA (1074bp) protein (358aa)
hypothetical protein
source missing description 57..237 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=GWB1_OD1_49_6_curated
B_1_S1_Biohub_coassembly_k141_4676334_20
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists


comp(17289..18731)
DNA (1443bp) protein (481aa)
Aspartyl-tRNA synthetase Tax=sediment metagenome RepID=D9PKA2_9ZZZZ bin=GWF1_OP11_31_35_complete species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
aspartyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
B_1_S1_Biohub_coassembly_k141_4676334_21
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

18755..19246
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Pseudomonas putida LF54 RepID=U2SX49_PSEPU
MgtC/SapB transporter
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_4676334_22
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(19711..20346)
DNA (636bp) protein (212aa)
Putative uncharacterized protein Tax=Fusobacterium RepID=C6JNJ1_FUSVA bin=ACD81 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_4676334_23

Not on your lists

comp(20449..22017)
DNA (1569bp) protein (523aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW16791.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
B_1_S1_Biohub_coassembly_k141_4676334_24
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(22230..23987)
DNA (1758bp) protein (586aa)
seg bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
B_1_S1_Biohub_coassembly_k141_4676334_25
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(24011..25753)
DNA (1743bp) protein (581aa)
Caib/baif family protein Tax=uncultured bacterium RepID=K2BXJ4_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_4676334_26
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(25788..27590)
DNA (1803bp) protein (601aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW48312.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
B_1_S1_Biohub_coassembly_k141_4676334_27
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(27638..27913)
DNA (276bp) protein (92aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B792B0
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_4676334_28
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(27913..28215)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9F9C0_9CYAN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
B_1_S1_Biohub_coassembly_k141_4676334_29
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

28348..29820
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036E7BB8
hypothetical protein
Tax=CG_Wolfe_01
Displaying items 1-30 of 46 in total

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