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B_1_S1_Biohub_coassembly_k141_2860804

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2860804_1
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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2..559
DNA (558bp) protein (186aa)
Resolvase, N-terminal domain Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FSE2_DEHSB
resolvase domain-containing protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_trna_2
unknown

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comp(421..493)
DNA (73bp)
transferRNA Ala
B_1_S1_Biohub_coassembly_k141_2860804_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1858..3144)
DNA (1287bp) protein (429aa)
major facilitator superfamily MFS_1 Tax=Bacillus sp. 10403023 RepID=UPI00028916F1
Uncharacterized protein {ECO:0000313|EMBL:ETW95561.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
major facilitator superfamily MFS_1
B_1_S1_Biohub_coassembly_k141_2860804_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3361..4644)
DNA (1284bp) protein (428aa)
cts:Ctha_1055 STE24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
CAAX prenyl protease 1
Tax=CG_Delta_05
B_1_S1_Biohub_coassembly_k141_2860804_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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4848..7130
DNA (2283bp) protein (761aa)
chy:CHY_0443 ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
pyruvate phosphate dikinase (EC:2.7.9.1)
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_2860804_5

Not on your lists

comp(7131..7496)
DNA (366bp) protein (122aa)
Marine sediment metagenome DNA, contig: S06H3_S05943 {ECO:0000313|EMBL:GAI27678.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2860804_6
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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7951..8742
DNA (792bp) protein (264aa)
30S ribosomal protein S2 Tax=Dehalococcoides mccartyi RepID=RS2_DEHSB
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain CBDB1).;"
B_1_S1_Biohub_coassembly_k141_2860804_7

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8765..9271
DNA (507bp) protein (169aa)
Elongation factor Ts Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9H7_DEHE1
Marine sediment metagenome DNA, contig: S01H4_S14004 {ECO:0000313|EMBL:GAG97525.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
elongation factor Ts
B_1_S1_Biohub_coassembly_k141_2860804_8
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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9300..10025
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase Tax=Dehalococcoides ethenogenes (strain 195) RepID=PYRH_DEHE1
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_2860804_9

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10027..10584
DNA (558bp) protein (186aa)
Ribosome-recycling factor Tax=Dehalococcoides ethenogenes (strain 195) RepID=RRF_DEHE1
Marine sediment metagenome DNA, contig: S06H3_L01159 {ECO:0000313|EMBL:GAI17745.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
frr; ribosome recycling factor
B_1_S1_Biohub_coassembly_k141_2860804_10

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10589..11341
DNA (753bp) protein (251aa)
uppS; UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9I0_DEHE1
Marine sediment metagenome DNA, contig: S12H4_S02036 {ECO:0000313|EMBL:GAI90904.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2860804_11
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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11335..12198
DNA (864bp) protein (288aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phosphatidate cytidylyltransferase
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_12
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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12195..13328
DNA (1134bp) protein (378aa)
dev:DhcVS_315 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_2860804_13
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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13322..14380
DNA (1059bp) protein (353aa)
Site-2 protease, Metallo peptidase, MEROPS family M50B Tax=Dehalococcoides mccartyi RepID=A5FS86_DEHSB
membrane-associated zinc metalloprotease
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_14
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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14575..15054
DNA (480bp) protein (160aa)
CHRD domain containing protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4X7_NITHN
CHRD domain-containing protein
Tax=RBG_16_Bathyarchaeota_57_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15266..15712
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G2E1_RHIML
Uncharacterized protein {ECO:0000313|EMBL:ETK35310.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
B_1_S1_Biohub_coassembly_k141_2860804_16
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15726..15935
DNA (210bp) protein (70aa)
Tax=GWA2_Deltaproteobacteria_47_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_17

Not on your lists

comp(16163..17446)
DNA (1284bp) protein (428aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR4_DEHLB
Marine sediment metagenome DNA, contig: S01H4_L01661 {ECO:0000313|EMBL:GAG57491.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2860804_18

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comp(17548..18240)
DNA (693bp) protein (231aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S12H4_C01394 {ECO:0000313|EMBL:GAI59555.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CDP-alcohol-phosphatidyltransferase
B_1_S1_Biohub_coassembly_k141_2860804_19
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(18215..19354)
DNA (1140bp) protein (380aa)
Glycosyl transferase group 1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR2_DEHLB
glycosyl transferase group 1 protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_2860804_20
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(19406..20503)
DNA (1098bp) protein (366aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase Tax=Dehalococcoides mccartyi RepID=D2BI30_DEHSV
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_21
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(20532..21470)
DNA (939bp) protein (313aa)
tRNA pseudouridine synthase B Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJS8_9CHLR
truB; tRNA pseudouridine synthase B
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_22

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comp(21472..21825)
DNA (354bp) protein (118aa)
Ribosome-binding factor A Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZQ7_DEHLB
Marine sediment metagenome DNA, contig: S12H4_S03042 {ECO:0000313|EMBL:GAJ01860.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribosome-binding factor A
B_1_S1_Biohub_coassembly_k141_2860804_23
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(21839..23683)
DNA (1845bp) protein (615aa)
Translation initiation factor IF-2 Tax=Dehalococcoides mccartyi RepID=IF2_DEHSB
translation initiation factor 2
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_2860804_24
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(24074..25489)
DNA (1416bp) protein (472aa)
Transcription elongation factor NusA Tax=Dehalococcoides mccartyi GY50 RepID=V5QBM7_9CHLR
nusA; transcription elongation factor NusA
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_2860804_25
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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25677..26102
DNA (426bp) protein (142aa)
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_2860804_26
unknown

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26099..27115
DNA (1017bp) protein (339aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2860804_27
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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27276..29528
DNA (2253bp) protein (751aa)
Repeat domain protein Tax=Rhodopirellula maiorica SM1 RepID=M5RF93_9PLAN
Repeat domain protein {ECO:0000313|EMBL:EMI18030.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2860804_28
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(29610..29936)
DNA (327bp) protein (109aa)
Uncharacterized protein bin=GWB1_Spirochaetes_59_5 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
electron transporter RnfE
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_2860804_29

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comp(30159..31049)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR6_DEHLB
Marine sediment metagenome DNA, contig: S01H4_L04660 {ECO:0000313|EMBL:GAG88674.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydrodipicolinate synthase
Displaying items 1-30 of 60 in total

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