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B_1_S1_Biohub_coassembly_k141_3625193

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3625193_1
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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3..332
DNA (330bp) protein (110aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00037A3931
major facilitator superfamily protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3625193_2
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

1183..2274
DNA (1092bp) protein (364aa)
Putative Methyltransferase Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR07_CLOSD
putative Methyltransferase
Tax=RBG_13_Chloroflexi_54_8_curated
B_1_S1_Biohub_coassembly_k141_3625193_3

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2797..3369
DNA (573bp) protein (191aa)
Response regulator receiver protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3U6_DEHLB
Marine sediment metagenome DNA, contig: S01H4_L01139 {ECO:0000313|EMBL:GAG71241.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver protein
B_1_S1_Biohub_coassembly_k141_3625193_4
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

3579..5930
DNA (2352bp) protein (784aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
signal transduction histidine kinase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_3625193_5

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5881..6579
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MHW3_9EURY
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49480.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3625193_6
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6616..7071)
DNA (456bp) protein (152aa)
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_3625193_7
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(7128..7472)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Halanaerobium hydrogeniformans RepID=E4RLM0_HALHG
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_3625193_8
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7960..8964)
DNA (1005bp) protein (335aa)
Putative esterase of the alpha-beta hydrolase superfamily Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GG04_9CYAN
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EKQ67863.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
patatin
B_1_S1_Biohub_coassembly_k141_3625193_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9658..10464
DNA (807bp) protein (269aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WLX5_GEOS8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
B_1_S1_Biohub_coassembly_k141_3625193_10
GWB1_OP11_39_10b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10770..12299
DNA (1530bp) protein (510aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ94208.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10b.;"
id=24499997 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PKD protein
B_1_S1_Biohub_coassembly_k141_3625193_11

Not on your lists

12610..14178
DNA (1569bp) protein (523aa)
Marine sediment metagenome DNA, contig: S06H3_S13225 {ECO:0000313|EMBL:GAI40816.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_3625193_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14336..14818)
DNA (483bp) protein (161aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3625193_13
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..17109)
DNA (2082bp) protein (694aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4ED44
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
B_1_S1_Biohub_coassembly_k141_3625193_14
unknown

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17607..18152
DNA (546bp) protein (182aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3625193_15
unknown

Not on your lists

comp(18375..18716)
DNA (342bp) protein (114aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3625193_16
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

19200..19604
DNA (405bp) protein (135aa)
General secretion protein Tax=Dehalococcoides mccartyi GY50 RepID=V5QDL4_9CHLR
general secretion family protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3625193_17
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19827..20870
DNA (1044bp) protein (348aa)
O-methyltransferase Tax=Streptomyces auratus AGR0001 RepID=J2JTK4_9ACTO
O-methyltransferase {ECO:0000313|EMBL:EJJ03758.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
O-methyltransferase
B_1_S1_Biohub_coassembly_k141_3625193_18
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(21000..21404)
DNA (405bp) protein (135aa)
Two component transcriptional regulator, winged helix family Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYK5_HERA2
two component transcriptional regulator
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3625193_19
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(21699..22346)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6S1_SPHTD
two component transcriptional regulator, LuxR family
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3625193_20

Not on your lists

22682..23203
DNA (522bp) protein (174aa)
Two component transcriptional regulator, LuxR family Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1F9_DEHLB
Marine sediment metagenome DNA, contig: S06H3_S03391 {ECO:0000313|EMBL:GAI28769.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LuxR family two component transcriptional regulator
B_1_S1_Biohub_coassembly_k141_3625193_21

Not on your lists

23169..23486
DNA (318bp) protein (106aa)
LuxR family DNA-binding response regulator Tax=Dehalococcoides mccartyi GY50 RepID=V5QCU7_9CHLR
Marine sediment metagenome DNA, contig: S12H4_S02937 {ECO:0000313|EMBL:GAJ01129.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LuxR family DNA-binding response regulator
B_1_S1_Biohub_coassembly_k141_3625193_22
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

23721..25241
DNA (1521bp) protein (507aa)
dev:DhcVS_1133 type II secretion system protein; K02454 general secretion pathway protein E bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
secretion system protein E
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3625193_23
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

25247..26458
DNA (1212bp) protein (404aa)
Type II secretion system protein F Tax=Dehalococcoides mccartyi DCMB5 RepID=M1QWN1_9CHLR
type II secretion system protein F
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_3625193_24
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

26470..26862
DNA (393bp) protein (131aa)
Type II secretion system protein, GspI/GspJ family Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z6T5_DEHE1
type II secretion system protein, GspI
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_3625193_25
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

26859..27368
DNA (510bp) protein (170aa)
Tax=RBG_16_Chloroflexi_50_11_curated
B_1_S1_Biohub_coassembly_k141_3625193_26
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

27441..28292
DNA (852bp) protein (284aa)
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_3625193_27
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

28311..28874
DNA (564bp) protein (188aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3625193_28

Not on your lists

28876..30648
DNA (1773bp) protein (591aa)
Marine sediment metagenome DNA, contig: S06H3_C00421 {ECO:0000313|EMBL:GAH98188.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dev:DhcVS_1140 Tfp pilus assembly protein ATPase; K02662 type IV pilus assembly protein PilM bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
type IV pilus assembly family protein
B_1_S1_Biohub_coassembly_k141_3625193_29
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

30666..31790
DNA (1125bp) protein (375aa)
det:DET1359 pilT-3; twitching mobility protein; K02669 twitching motility protein PilT bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
twitching motility protein
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_3625193_30
unknown

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32174..32437
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 88 in total

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