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B_1_S1_Biohub_coassembly_k141_4446533

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4446533_1
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

228..851
DNA (624bp) protein (208aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FPZ1_DEHSB
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4446533_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

877..1749
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1C6_DEHLB
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_3
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

1869..3599
DNA (1731bp) protein (577aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI00031284EA
RND family efflux transporter MFP subunit
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4446533_4
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

3596..4264
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein Tax=Thermobrachium celere DSM 8682 RepID=R7RPA4_9CLOT
putative ABC transporter ATP-binding protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_5
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

4261..5499
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Pelosinus fermentans RepID=I8RYS4_9FIRM
ABC transporter
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_6
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

5760..6503
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi RepID=M1Q536_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4446533_7
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

6532..7335
DNA (804bp) protein (268aa)
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_4446533_8

Not on your lists

comp(7566..8021)
DNA (456bp) protein (152aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003687712
Marine sediment metagenome DNA, contig: S03H2_S19471 {ECO:0000313|EMBL:GAH85761.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4446533_9

Not on your lists

comp(8143..8826)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLD8_METZD
Marine sediment metagenome DNA, contig: S01H4_S07119 {ECO:0000313|EMBL:GAG94054.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4446533_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(8854..9930)
DNA (1077bp) protein (359aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Dehalococcoides mccartyi RepID=RUVB_DEHSB
Holliday junction DNA helicase RuvB
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_4446533_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

10120..11436
DNA (1317bp) protein (439aa)
Nodulation efficiency protein NfeD Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LRC1_THEPS
nfeD; nodulation efficiency protein NfeD
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_12

Not on your lists

11433..12215
DNA (783bp) protein (261aa)
SPFH domain/band 7 family domain protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z874_DEHE1
Marine sediment metagenome DNA, contig: S03H2_L03018 {ECO:0000313|EMBL:GAH36555.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein
B_1_S1_Biohub_coassembly_k141_4446533_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(12311..13162)
DNA (852bp) protein (284aa)
Biotin/acetyl-CoA-carboxylase ligase Tax=Dehalococcoides mccartyi RepID=D3SIT8_DEHSG
biotin--acetyl-CoA carboxylase ligase
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_4446533_trna_1
unknown

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13366..13454
DNA (89bp)
transferRNA Ser
B_1_S1_Biohub_coassembly_k141_4446533_14
unknown

Not on your lists

comp(13539..13721)
DNA (183bp) protein (61aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4446533_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

14008..15342
DNA (1335bp) protein (445aa)
RNA modification protein Tax=uncultured prokaryote RepID=H5SLF2_9ZZZZ
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4446533_16
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

15352..15738
DNA (387bp) protein (129aa)
Preprotein translocase, YajC subunit Tax=Bacteroides RepID=C3RDH1_9BACE bin=RBG2 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG2 organism_group=Chloroflexi
yajC; preprotein translocase subunit
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4446533_17
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

15840..16730
DNA (891bp) protein (297aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
UniRef90_F2NN76 Nicotinate-nucleotide pyrophosphorylase Tax=Marinithermus hydrothermalis DSM 14884 RepID=F2NN76_MARHT bin=RBG2 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_18
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16734..17537)
DNA (804bp) protein (268aa)
High-affinity nickel-transport family protein bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
high-affinity nickel-transporter
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_19

Not on your lists

comp(17534..17974)
DNA (441bp) protein (147aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Fervidobacterium pennivorans DSM 9078 RepID=G6HS86_FERPE bin=RBG2 species=Fervidobacterium pennivorans genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S12H4_L04438 {ECO:0000313|EMBL:GAI76021.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
D-tyrosyl-tRNA(Tyr) deacylase
B_1_S1_Biohub_coassembly_k141_4446533_20
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

18462..19865
DNA (1404bp) protein (468aa)
Magnesium chelatase subunit ChlI Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6I7_9CHLR
magnesium chelatase subunit ChlI
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4446533_21
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

20026..22050
DNA (2025bp) protein (675aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036744DA
von Willebrand factor type A
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4446533_22
unknown

Not on your lists

22119..22358
DNA (240bp) protein (80aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4446533_23
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

22360..22776
DNA (417bp) protein (139aa)
HicB domain-containing protein Tax=Dehalococcoides mccartyi BTF08 RepID=M1QTE6_9CHLR
HicB domain-containing protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4446533_24
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22922..24064
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Gloeocapsa sp. PCC 7428 RepID=K9XND1_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ33556.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
B_1_S1_Biohub_coassembly_k141_4446533_25
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(24107..24757)
DNA (651bp) protein (217aa)
hypothetical protein Tax=cellular organisms RepID=UPI00037EB8C7
Tax=RBG_16_Chloroflexi_57_8_curated
Displaying 26 items

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