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B_1_S1_Biohub_coassembly_k141_5416015

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5416015_1
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
integrase catalytic region bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
integrase catalytic subunit
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_2
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(351..512)
DNA (162bp) protein (54aa)
Integrase catalytic region Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2K1_DEHLB
integrase catalytic subunit
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_3
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(1524..2189)
DNA (666bp) protein (222aa)
putative winged helix family two component transcriptional regulator bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative winged helix family two component transcriptional regulator
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5416015_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2314..3081)
DNA (768bp) protein (256aa)
glutamate synthase (NADPH) GltB3 subunit (EC:1.4.1.13)
Glutamate synthase subunit gltB3 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5416015_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3085..4587)
DNA (1503bp) protein (501aa)
dly:Dehly_0987 glutamate synthase (EC:1.4.1.13) bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
glutamate synthase (EC:1.4.1.13)
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5416015_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4799..5170)
DNA (372bp) protein (124aa)
glyoxalase Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F086
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:KIE46717.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glyoxalase
B_1_S1_Biohub_coassembly_k141_5416015_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5184..5960)
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF Tax=Roseiflexus sp. (strain RS-1) RepID=HIS6_ROSS1
imidazole glycerol phosphate synthase subunit HisF
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5950..7095)
DNA (1146bp) protein (382aa)
dly:Dehly_0989 glutamine amidotransferase class-II bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
glutamine amidotransferase
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7124..8452)
DNA (1329bp) protein (443aa)
dly:Dehly_0990 FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5416015_10
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8480..9112)
DNA (633bp) protein (211aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9124..9564)
DNA (441bp) protein (147aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MSV4_9THEO
4Fe-4S ferredoxin
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5416015_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9760..10410)
DNA (651bp) protein (217aa)
two component LuxR family transcriptional regulator bin=bin1_lowGC species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
two component LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_13
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10472..10621)
DNA (150bp) protein (50aa)
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_5416015_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(10646..11305)
DNA (660bp) protein (220aa)
Cytochrome c assembly protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZH9_DEHLB
cytochrome c assembly protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_15
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(11321..11992)
DNA (672bp) protein (224aa)
Cytochrome c-type biogenesis protein CcmB Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZH8_DEHLB
cytochrome c-type biogenesis protein CcmB
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(11989..12729)
DNA (741bp) protein (247aa)
ABC transporter related protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZH7_DEHLB
ABC transporter-like protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_17
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12726..13904)
DNA (1179bp) protein (393aa)
id=14630973 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_5416015_18
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13916..14476)
DNA (561bp) protein (187aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_5416015_19
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14473..14958)
DNA (486bp) protein (162aa)
hypothetical protein
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH bin=bin9_gal15 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_5416015_20
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14972..16936)
DNA (1965bp) protein (655aa)
Cytochrome c assembly protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZH4_DEHLB
cytochrome c assembly protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_5416015_21
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(16924..17376)
DNA (453bp) protein (151aa)
Cytochrome c-type biogenesis protein CcmE Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZH3_DEHLB
cytochrome c-type biogenesis protein CcmE
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_5416015_22
unknown

Not on your lists

comp(17921..18109)
DNA (189bp) protein (63aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5416015_23
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18223..19140)
DNA (918bp) protein (306aa)
hypothetical protein bin=bin9_gal15 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
Cytochrome c family protein
Tax=CSP1_3_Armatimonadetes
B_1_S1_Biohub_coassembly_k141_5416015_24
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(19192..19899)
DNA (708bp) protein (236aa)
Hypothetical membrane protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_25
R_OP11_Curtissbacteria_42_15, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(20122..20346)
DNA (225bp) protein (75aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SVT8_9BACT
YcfA family protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_42_15_curated
B_1_S1_Biohub_coassembly_k141_5416015_26
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(20339..20560)
DNA (222bp) protein (74aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SG82_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
B_1_S1_Biohub_coassembly_k141_5416015_27
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(20574..20750)
DNA (177bp) protein (59aa)
hypothetical protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5416015_28
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(20804..21331)
DNA (528bp) protein (176aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5416015_trna_5
unknown

Not on your lists

comp(21377..21447)
DNA (71bp)
transferRNA Gln
B_1_S1_Biohub_coassembly_k141_5416015_trna_4
unknown

Not on your lists

comp(21460..21545)
DNA (86bp)
transferRNA Leu
Displaying items 1-30 of 100 in total

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