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B_1_S1_Biohub_coassembly_k141_1024857

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1024857_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3..893
DNA (891bp) protein (297aa)
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBE68084.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pyridoxal-phosphate (PLP) dependent enzymes family subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY4_9BACT
B_1_S1_Biohub_coassembly_k141_1024857_2
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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1030..1974
DNA (945bp) protein (315aa)
selD; Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) (EC:2.7.9.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Selenide, water dikinase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_1024857_3

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2035..2451
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL81801.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Mov34/MPN/PAD-1 family protein bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Mov34/MPN/PAD-1 family protein
B_1_S1_Biohub_coassembly_k141_1024857_4
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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2585..4327
DNA (1743bp) protein (581aa)
Efflux transporter, RND family, MFP subunit Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GA61_CHLAD
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACL24576.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
B_1_S1_Biohub_coassembly_k141_1024857_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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4342..5028
DNA (687bp) protein (229aa)
Putative ABC transporter ATP-binding protein Tax=Anaerolinea thermophila UNI-1 RepID=E8N398_ANATU bin=RBG2 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ABC-type antimicrobial peptide transport system,ATPase component
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_1024857_6
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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5039..6280
DNA (1242bp) protein (414aa)
Putative ABC transporter permease protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2J3_ANATU
ABC transporter permease
Tax=RBG_13_Chloroflexi_66_10_curated
B_1_S1_Biohub_coassembly_k141_1024857_7
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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6341..7270
DNA (930bp) protein (310aa)
Periplasmic serine protease Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY43_9AQUI
Periplasmic serine protease {ECO:0000313|EMBL:EDP74587.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
serine protease
B_1_S1_Biohub_coassembly_k141_1024857_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(7518..7778)
DNA (261bp) protein (87aa)
Cytotoxic translational repressor Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2A6_DEHLB
cytotoxic translational repressor
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1024857_9
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(7785..8096)
DNA (312bp) protein (104aa)
Transcriptional regulator, AbrB family Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2A5_DEHLB
AbrB family transcriptional regulator
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1024857_10
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(9267..10862)
DNA (1596bp) protein (532aa)
det:DET0825 putative alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
alpha-isopropylmalate/homocitrate synthase transferase
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_1024857_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(11102..12187)
DNA (1086bp) protein (362aa)
dev:DhcVS_730 leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
leuB; 3-isopropylmalate dehydrogenase
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_1024857_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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comp(12286..13401)
DNA (1116bp) protein (372aa)
dev:DhcVS_730 leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_1024857_13

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comp(13403..13906)
DNA (504bp) protein (168aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K051_DEHLB
Marine sediment metagenome DNA, contig: S06H3_L01018 {ECO:0000313|EMBL:GAI16677.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1024857_14
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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comp(13903..15159)
DNA (1257bp) protein (419aa)
3-isopropylmalate dehydratase large subunit Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJB2_DESK7
3-isopropylmalate dehydratase large subunit
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_1024857_15
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(15170..16717)
DNA (1548bp) protein (516aa)
deb:DehaBAV1_0749 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_1024857_16
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(16741..17739)
DNA (999bp) protein (333aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00035C9C2A
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_1024857_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(17757..18284)
DNA (528bp) protein (176aa)
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit Tax=Dehalococcoides mccartyi RepID=A5FR45_DEHSB
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_1024857_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(18286..19980)
DNA (1695bp) protein (565aa)
Acetolactate synthase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K045_DEHLB
acetolactate synthase large subunit
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_1024857_19
unknown

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comp(20327..20473)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 19 items

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