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B_1_S1_Biohub_coassembly_k141_1287078

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1287078_1

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comp(3..458)
DNA (456bp) protein (152aa)
Phosphoheptose isomerase Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6Z2_9EURY
Marine sediment metagenome DNA, contig: S01H1_S28172 {ECO:0000313|EMBL:GAG34329.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphoheptose isomerase
B_1_S1_Biohub_coassembly_k141_1287078_2

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comp(451..1023)
DNA (573bp) protein (191aa)
Phosphoheptose isomerase Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9Z4_DEHE1
Marine sediment metagenome DNA, contig: S12H4_S21972 {ECO:0000313|EMBL:GAJ17365.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphoheptose isomerase
B_1_S1_Biohub_coassembly_k141_1287078_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(1025..1999)
DNA (975bp) protein (325aa)
GHMP kinase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5K1_CHLAD
GHMP kinase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
B_1_S1_Biohub_coassembly_k141_1287078_4
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(1996..2715)
DNA (720bp) protein (240aa)
Nucleotidyl transferase family protein Tax=Rhodopirellula maiorica SM1 RepID=M5REY2_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KHE91506.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
B_1_S1_Biohub_coassembly_k141_1287078_5

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comp(2712..3632)
DNA (921bp) protein (307aa)
galE-3; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHO53848.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
NAD-dependent epimerase/dehydratase bin=GWA1_Kazan_50_15 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
B_1_S1_Biohub_coassembly_k141_1287078_6
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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comp(3636..4613)
DNA (978bp) protein (326aa)
COG1089: GDP-D-mannose dehydratase bin=GWF2_OP3_38_59 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
NAD-dependent epimerase/dehydratase
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
B_1_S1_Biohub_coassembly_k141_1287078_7
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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comp(4641..6077)
DNA (1437bp) protein (479aa)
Fe-S oxidoreductase Tax=Lawsonia intracellularis RepID=M1GDJ4_LAWIN
Fe-S oxidoreductase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
B_1_S1_Biohub_coassembly_k141_1287078_8
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6074..7048)
DNA (975bp) protein (325aa)
Glycosyl transferase family 2 Tax=Methanofollis liminatans DSM 4140 RepID=J1L215_9EURY
dolichyl-phosphate mannose synthase-like protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
B_1_S1_Biohub_coassembly_k141_1287078_9

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comp(7052..7756)
DNA (705bp) protein (235aa)
Putative glycosyltransferase (Family 2) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3D1_UNCMA
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:KKN41639.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1287078_10

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8047..8229
DNA (183bp) protein (61aa)
UPF0434 protein BSM_03760 Tax=uncultured archaeon RepID=D1JEE1_9ARCH
UPF0434 protein BSM_03760 {ECO:0000256|HAMAP-Rule:MF_01187}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1287078_11
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8330..9253
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Polaribacter irgensii 23-P RepID=A4C317_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAR11488.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;"
B_1_S1_Biohub_coassembly_k141_1287078_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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9424..10227
DNA (804bp) protein (268aa)
UDP-glucose/GDP-mannose dehydrogenase dimerization Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAP6_SPHTD
UDP-glucose/GDP-mannose dehydrogenase dimerization
UDP-glucose/GDP-mannose dehydrogenase dimerization {ECO:0000313|EMBL:ACZ40889.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
B_1_S1_Biohub_coassembly_k141_1287078_13
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10438..10803)
DNA (366bp) protein (122aa)
Cytochrome c, class I Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J1L4_DEIGD
cytochrome C6
Cytochrome c, class I {ECO:0000313|EMBL:ABF44620.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
B_1_S1_Biohub_coassembly_k141_1287078_14
unknown

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comp(11176..11604)
DNA (429bp) protein (143aa)

This feature has no annotations

Displaying 14 items

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