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B_1_S1_Biohub_coassembly_k141_3239157

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3239157_1
unknown

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3239157_2
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(170..1312)
DNA (1143bp) protein (381aa)
UPI0003D5A39F related cluster Tax=unknown RepID=UPI0003D5A39F
radical SAM protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3239157_3
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1340..1783)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Brevibacillus sp. BC25 RepID=J2FSS6_9BACL
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
B_1_S1_Biohub_coassembly_k141_3239157_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1851..3242)
DNA (1392bp) protein (464aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE76_CELFN
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADG76552.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
B_1_S1_Biohub_coassembly_k141_3239157_5
unknown

Not on your lists

comp(3255..3743)
DNA (489bp) protein (163aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3239157_6
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(3740..4933)
DNA (1194bp) protein (398aa)
Similar to moaA/nirJ/pqqE cofactor biosynthesis protein bin=GWA2_Planctomycetia_40_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
metallo cofactor biosynthesis protein
Tax=GWF2_Planctomycetes_40_8_curated
B_1_S1_Biohub_coassembly_k141_3239157_7
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5076..5939)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y1I2_PROPF
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
B_1_S1_Biohub_coassembly_k141_3239157_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6096..6482)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI0003669BAC
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
B_1_S1_Biohub_coassembly_k141_3239157_9
unknown

Not on your lists

comp(7188..7403)
DNA (216bp) protein (72aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3239157_10
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(7656..8669)
DNA (1014bp) protein (338aa)
deb:DehaBAV1_0170 integrase catalytic subunit bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative transposase
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_3239157_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8798..10063
DNA (1266bp) protein (422aa)
frc; formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase bin=GWF2_Syntrophobacterales_56_9 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_3239157_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10066..11253
DNA (1188bp) protein (396aa)
Putative CoA-transferase family III bin=GWC2_Syntrophobacterales_56_13 species=uncultured marine crenarchaeote HF4000_APKG6D9 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
putative acyl-CoA transferase/carnitine dehydratase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_3239157_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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comp(11600..11821)
DNA (222bp) protein (74aa)
Uncharacterized protein family UPF0150 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E7L9_9FIRM
hypothetical protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3239157_14
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12051..12977)
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MMT3_CALBD
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3239157_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(13169..13666)
DNA (498bp) protein (166aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
B_1_S1_Biohub_coassembly_k141_3239157_16
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13789..14535)
DNA (747bp) protein (249aa)
4Fe-4S ferredoxin Tax=Methanobacterium formicicum DSM 3637 RepID=K2REG7_METFO
iron-sulfur cluster-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:AIS33030.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
B_1_S1_Biohub_coassembly_k141_3239157_17
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(14708..15913)
DNA (1206bp) protein (402aa)
Putative CoA-transferase family III bin=GWF2_Methylomirabilis_70_14 species=uncultured marine crenarchaeote HF4000_APKG6D9 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_3239157_18
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15972..16610)
DNA (639bp) protein (213aa)
Beta-lactamase domain protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIK4_THET1
beta-lactamase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_3239157_19

Not on your lists

comp(16657..17877)
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK99696.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative CoA-transferase family III bin=GWF2_Methylomirabilis_70_14 species=uncultured marine crenarchaeote HF4000_APKG6D9 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formyl-CoA transferase
B_1_S1_Biohub_coassembly_k141_3239157_20
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

18186..19298
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XJM9_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
B_1_S1_Biohub_coassembly_k141_3239157_21
unknown

Not on your lists

19511..20335
DNA (825bp) protein (275aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3239157_22
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

20883..21092
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=uncultured bacterium RepID=Q565Y2_9BACT
hypothetical protein
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_3239157_23
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

21192..21350
DNA (159bp) protein (53aa)
Plasmid stabilization system Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEI2_RHOMR
plasmid stabilization system
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_3239157_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(21391..22728)
DNA (1338bp) protein (446aa)
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit bin=RBG_19FT_COMBO_GAL15_69_19 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_3239157_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(22732..24081)
DNA (1350bp) protein (450aa)
FAD linked oxidase-like protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MNA1_9BACT
FAD linked oxidase-like protein
FAD linked oxidase-like protein {ECO:0000313|EMBL:CBE70245.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
B_1_S1_Biohub_coassembly_k141_3239157_26
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(24074..25465)
DNA (1392bp) protein (464aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
FAD linked oxidase domain-containing protein
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_3239157_27
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

25630..26691
DNA (1062bp) protein (354aa)
glycerate kinase (EC:2.7.1.31)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00037BF95A
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3239157_28
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

26772..27134
DNA (363bp) protein (121aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
iscA; hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
B_1_S1_Biohub_coassembly_k141_3239157_29
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

27244..28326
DNA (1083bp) protein (361aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B2EAD
folate-binding protein YgfZ
Tax=GWA2_OP3_50_21_curated
B_1_S1_Biohub_coassembly_k141_3239157_30
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

28377..29084
DNA (708bp) protein (236aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
Thymidylate synthase ThyX Tax=uncultured candidate division OP1 bacterium RepID=H5SRC6_9BACT
Tax=MPF_Thermotogae_50_1627
Displaying items 1-30 of 38 in total

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