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B_1_S1_Biohub_coassembly_k141_3576611

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3576611_1
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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793..2523
DNA (1731bp) protein (577aa)
ABC transporter related protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5G9_9CHLR
ABC transporter
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_3576611_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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2533..4332
DNA (1800bp) protein (600aa)
ABC transporter related protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5G8_9CHLR
ABC transporter
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3576611_3
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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4462..4872
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Clostridium ultunense Esp RepID=M1YS38_9CLOT
methylmalonyl-CoA epimerase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
B_1_S1_Biohub_coassembly_k141_3576611_4
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4880..7003)
DNA (2124bp) protein (708aa)
Ferrous iron transport permease EfeU {ECO:0000313|EMBL:KJR44310.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
iron permease FTR1; K07243 high-affinity iron transporter bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
iron permease FTR1
B_1_S1_Biohub_coassembly_k141_3576611_5
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(7052..7879)
DNA (828bp) protein (276aa)
iron permease FTR1; K07243 high-affinity iron transporter bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
iron permease FTR1
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3576611_6
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

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comp(7913..8974)
DNA (1062bp) protein (354aa)
Putative ABC transporter (ATP binding protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS3_9BACT
ABC transporter ATP binding protein
Tax=RBG_16_Chloroflexi_48_7_curated
B_1_S1_Biohub_coassembly_k141_3576611_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(8983..10548)
DNA (1566bp) protein (522aa)
Binding-protein-dependent transport systems inner membrane component Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWT8_RUBXD
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG04140.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
B_1_S1_Biohub_coassembly_k141_3576611_8

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comp(10600..11643)
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036E97C7
Uncharacterized protein {ECO:0000313|EMBL:KKL79165.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
extracellular solute-binding protein
B_1_S1_Biohub_coassembly_k141_3576611_9
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12760..13545
DNA (786bp) protein (262aa)
30S ribosomal protein S2 Tax=Dehalococcoides mccartyi RepID=RS2_DEHSB
rpsB; 30S ribosomal protein S2
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3576611_10
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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13559..14065
DNA (507bp) protein (169aa)
Elongation factor Ts Tax=Dehalococcoides mccartyi RepID=A5FS78_DEHSB
translation elongation factor Ts
Tax=RBG_13_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3576611_11
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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14074..14799
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase Tax=Dehalococcoides mccartyi RepID=PYRH_DEHSC
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_3576611_12
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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14879..15436
DNA (558bp) protein (186aa)
Ribosome-recycling factor Tax=Thermincola potens (strain JR) RepID=D5XEZ5_THEPJ
ribosome recycling factor
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_3576611_13
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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15433..16212
DNA (780bp) protein (260aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N049_ANATU
Tax=RBG_16_Chloroflexi_64_32_curated
B_1_S1_Biohub_coassembly_k141_3576611_14
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

16261..17052
DNA (792bp) protein (264aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phosphatidate cytidylyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_3576611_15
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

17049..18170
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Bacteria RepID=UPI00035FD0CD
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_3576611_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

18155..19225
DNA (1071bp) protein (357aa)
Membrane-associated zinc metalloprotease Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3K4_DEHLB
membrane-associated zinc metalloprotease
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3576611_17

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19222..20301
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Bacteria RepID=UPI0003644CD9
Marine sediment metagenome DNA, contig: S12H4_C01865 {ECO:0000313|EMBL:GAI64772.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
B_1_S1_Biohub_coassembly_k141_3576611_18
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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20314..21348
DNA (1035bp) protein (345aa)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Displaying 18 items

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