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B_1_S1_Biohub_coassembly_k141_4976434

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4976434_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(1..1662)
DNA (1662bp) protein (554aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00037FEED8
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_4976434_2

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1805..2611
DNA (807bp) protein (269aa)
Marine sediment metagenome DNA, contig: S12H4_C00901 {ECO:0000313|EMBL:GAI70779.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
greA; transcription elongation factor; K03624 transcription elongation factor GreA bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
greA; transcription elongation factor GreA
B_1_S1_Biohub_coassembly_k141_4976434_3
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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3075..3866
DNA (792bp) protein (264aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
Cytochrome c oxidase subunit 2 Tax=uncultured Chloroflexi bacterium RepID=H5SDZ8_9CHLR
heme/copper-type cytochrome/quinol oxidase subunit 2
B_1_S1_Biohub_coassembly_k141_4976434_4
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

3918..5798
DNA (1881bp) protein (627aa)
Cytochrome c oxidase subunit I Tax=uncultured Chloroflexi bacterium RepID=H5SDZ7_9CHLR
putative cytochrome c oxidase subunit I
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5809..6390
DNA (582bp) protein (194aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F346_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
B_1_S1_Biohub_coassembly_k141_4976434_trna_1
unknown

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comp(6445..6518)
DNA (74bp)
transferRNA Pro
B_1_S1_Biohub_coassembly_k141_4976434_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(6769..9960)
DNA (3192bp) protein (1064aa)
Uncharacterized protein Tax=Bacteria RepID=H0P4U8_9SYNC
slr1243; hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
B_1_S1_Biohub_coassembly_k141_4976434_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

10147..10872
DNA (726bp) protein (242aa)
nfi; nfi endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nfi; endonuclease V (EC:3.1.21.7)
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_4976434_8
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

11061..12002
DNA (942bp) protein (314aa)
det:DET0570 prfB; peptide chain release factor 2, programmed frameshift; K02836 peptide chain release factor RF-2 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
prfB; peptide chain release factor 2
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_9
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

12010..13476
DNA (1467bp) protein (489aa)
Peptidase MA domain-containing protein Tax=Dehalococcoides mccartyi RepID=M1QV39_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4976434_10
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

13463..15634
DNA (2172bp) protein (724aa)
dly:Dehly_0558 extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ABC transporter substrate-binding protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_4976434_11
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15631..16212)
DNA (582bp) protein (194aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
CDP-alcohol-phosphatidyltransferase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_12
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(16212..17369)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Bacteria RepID=UPI00036DFAD7
group 1 glycosyl transferase
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_4976434_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17370..18134)
DNA (765bp) protein (255aa)
PHP domain protein bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphotransferase domain-containing protein
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_14
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18131..19009)
DNA (879bp) protein (293aa)
Lipid A biosynthesis acyltransferase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3R1_SPHTD
lipid A biosynthesis acyltransferase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_15
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(19009..19878)
DNA (870bp) protein (290aa)
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-); K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
lipid A biosynthesis lauroyl acyltransferase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4976434_16

Not on your lists

comp(19875..20951)
DNA (1077bp) protein (359aa)
Myo-inositol-1-phosphate synthase family protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7U7_DEHE1
Marine sediment metagenome DNA, contig: S01H1_L01190 {ECO:0000313|EMBL:GAF76228.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
myo-inositol-1-phosphate synthase
B_1_S1_Biohub_coassembly_k141_4976434_17
unknown

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comp(21098..21202)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 18 items

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