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B_1_S1_Biohub_coassembly_k141_2473178

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2473178_1
unknown

Not on your lists

comp(3..1037)
DNA (1035bp) protein (345aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

1385..2080
DNA (696bp) protein (232aa)
hypothetical protein Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000364F4AA
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_2473178_3
unknown

Not on your lists

comp(2300..2413)
DNA (114bp) protein (38aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_4
unknown

Not on your lists

3030..5120
DNA (2091bp) protein (697aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_5

Not on your lists

5121..5951
DNA (831bp) protein (277aa)
Membrane protein, putative Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKL8_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KKL18414.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2473178_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

6043..7152
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003776526
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
B_1_S1_Biohub_coassembly_k141_2473178_7
unknown

Not on your lists

comp(7379..7537)
DNA (159bp) protein (53aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_8
unknown

Not on your lists

comp(7574..7723)
DNA (150bp) protein (50aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_9

Not on your lists

comp(7903..9882)
DNA (1980bp) protein (660aa)
Selenocysteine-specific translation elongation factor Tax=uncultured bacterium BAC10-10 RepID=Q4JIN1_9BACT
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AAY89283.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
selB; selenocysteine-specific elongation factor
B_1_S1_Biohub_coassembly_k141_2473178_10
unknown

Not on your lists

comp(9883..10173)
DNA (291bp) protein (97aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_11
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10170..11411)
DNA (1242bp) protein (414aa)
Putative ATPase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUL6_SORC5
ATPase
Tax=CG_Delta_07
B_1_S1_Biohub_coassembly_k141_2473178_12

Not on your lists

comp(11488..12870)
DNA (1383bp) protein (461aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=uncultured bacterium BAC10-10 RepID=Q4JIN0_9BACT
B_1_S1_Biohub_coassembly_k141_2473178_13
unknown

Not on your lists

comp(13108..13488)
DNA (381bp) protein (127aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13941..15422)
DNA (1482bp) protein (494aa)
GTPase Der Tax=Pedosphaera parvula Ellin514 RepID=B9XIX9_9BACT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribosome-associated GTPase EngA
B_1_S1_Biohub_coassembly_k141_2473178_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15554..16234
DNA (681bp) protein (227aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:CDM65054.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CDM65054.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Carbon-monoxide dehydrogenase small subunit Tax=uncultured Acidobacteria bacterium RepID=H5SFU4_9BACT
2Fe-2S iron-sulfur cluster binding domain-containing protein
B_1_S1_Biohub_coassembly_k141_2473178_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

16239..18587
DNA (2349bp) protein (783aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SFU3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
B_1_S1_Biohub_coassembly_k141_2473178_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

18584..19429
DNA (846bp) protein (282aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
Molybdopterin dehydrogenase FAD-binding protein Tax=uncultured Acidobacteria bacterium RepID=H5SFU2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
B_1_S1_Biohub_coassembly_k141_2473178_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

19592..20587
DNA (996bp) protein (332aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=Paenibacillus lactis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_2473178_19
unknown

Not on your lists

comp(20584..20763)
DNA (180bp) protein (60aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_20
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

20832..21671
DNA (840bp) protein (280aa)
Sodium/myo-inositol cotransporter bin=GWF2_Planctomycetes_42_9 species=Glaciecola psychrophila genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
B_1_S1_Biohub_coassembly_k141_2473178_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

21911..22867
DNA (957bp) protein (319aa)
Putative uncharacterized protein bin=GWF2_Planctomycete_41_51 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
B_1_S1_Biohub_coassembly_k141_2473178_22
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23026..23274)
DNA (249bp) protein (83aa)
Ligand-gated TonB-dependent outer membrane channel Tax=Geobacter metallireducens RepID=Q39V24_GEOMG
ligand-gated TonB-dependent outer membrane channel
Ligand-gated TonB-dependent outer membrane channel {ECO:0000313|EMBL:ABB31900.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
B_1_S1_Biohub_coassembly_k141_2473178_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23333..23554)
DNA (222bp) protein (74aa)
Helix-turn-helix protein, CopG family protein Tax=Agrobacterium albertimagni AOL15 RepID=K2QG50_9RHIZ
Helix-turn-helix protein, CopG family protein {ECO:0000313|EMBL:EKF60081.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Helix-turn-helix protein, CopG family protein
B_1_S1_Biohub_coassembly_k141_2473178_24
uncultured verrucomicrobium HF0500_16O23, Verrucomicrobia, Bacteria

Not on your lists

comp(23913..26942)
DNA (3030bp) protein (1010aa)
Glucose/sorbosone dehydrogenases Tax=uncultured verrucomicrobium HF0500_16O23 RepID=E7C570_9BACT
Glucose/sorbosone dehydrogenases {ECO:0000313|EMBL:ADI22594.1}; species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured verrucomicrobium HF0500_16O23.;"
heme-binding protein
B_1_S1_Biohub_coassembly_k141_2473178_25
unknown

Not on your lists

comp(26968..27468)
DNA (501bp) protein (167aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_26
unknown

Not on your lists

comp(27422..28171)
DNA (750bp) protein (250aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_27
unknown

Not on your lists

28507..28662
DNA (156bp) protein (52aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_28
unknown

Not on your lists

comp(28590..28799)
DNA (210bp) protein (70aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_29
unknown

Not on your lists

comp(28804..29448)
DNA (645bp) protein (215aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2473178_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(29553..32162)
DNA (2610bp) protein (870aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003036202
Sulfatase {ECO:0000313|EMBL:EDY18204.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sulfatase
Displaying items 1-30 of 34 in total

View Taxonomy