ggKbase home page

B_1_S1_Biohub_coassembly_k141_176470

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_176470_1
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..179)
DNA (177bp) protein (59aa)
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_176470_2
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(208..1770)
DNA (1563bp) protein (521aa)
Tax=RBG_13_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_176470_3
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1767..2282)
DNA (516bp) protein (172aa)
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_176470_4
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(2307..3074)
DNA (768bp) protein (256aa)
Tax=RBG_13_Chloroflexi_51_18_curated
B_1_S1_Biohub_coassembly_k141_176470_5
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3095..3760)
DNA (666bp) protein (222aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_176470_6
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(3762..4715)
DNA (954bp) protein (318aa)
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_176470_7
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(4857..5597)
DNA (741bp) protein (247aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_176470_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5804..6730)
DNA (927bp) protein (309aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_176470_9
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6730..6951)
DNA (222bp) protein (74aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_176470_10

Not on your lists

comp(6966..7502)
DNA (537bp) protein (179aa)
Marine sediment metagenome DNA, contig: S03H2_L00103 {ECO:0000313|EMBL:GAH27686.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_176470_11
Dehalococcoides sp. UCH007, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8060..9238)
DNA (1179bp) protein (393aa)
DNA, complete genome {ECO:0000313|EMBL:BAQ34754.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides sp. UCH007.;"
B_1_S1_Biohub_coassembly_k141_176470_12
unknown

Not on your lists

comp(9235..10404)
DNA (1170bp) protein (390aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_176470_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

10479..10670
DNA (192bp) protein (64aa)
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_176470_14
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10675..10866
DNA (192bp) protein (64aa)
DNA-binding protein {ECO:0000313|EMBL:ESY20382.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
B_1_S1_Biohub_coassembly_k141_176470_15
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10863..13247
DNA (2385bp) protein (795aa)
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:ABN54046.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
B_1_S1_Biohub_coassembly_k141_176470_16
unknown

Not on your lists

13226..13840
DNA (615bp) protein (205aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_176470_17
unknown

Not on your lists

14088..14333
DNA (246bp) protein (82aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_176470_18
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14333..14710
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:CCF85912.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
B_1_S1_Biohub_coassembly_k141_176470_19
unknown

Not on your lists

14700..14912
DNA (213bp) protein (71aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_176470_20
unknown

Not on your lists

14902..15111
DNA (210bp) protein (70aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_176470_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15330..16499)
DNA (1170bp) protein (390aa)
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57902.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
B_1_S1_Biohub_coassembly_k141_176470_22
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

16923..17642
DNA (720bp) protein (240aa)
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_176470_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17775..18419
DNA (645bp) protein (215aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
B_1_S1_Biohub_coassembly_k141_176470_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(18444..18890)
DNA (447bp) protein (149aa)
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_176470_25
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(18955..19200)
DNA (246bp) protein (82aa)
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_176470_26
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(19243..20427)
DNA (1185bp) protein (395aa)
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_176470_27

Not on your lists

comp(20428..21144)
DNA (717bp) protein (239aa)
Marine sediment metagenome DNA, contig: S01H4_S07771 {ECO:0000313|EMBL:GAH02136.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_176470_28

Not on your lists

comp(21193..21720)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S03H2_S23397 {ECO:0000313|EMBL:GAH85450.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_176470_29

Not on your lists

comp(21923..22768)
DNA (846bp) protein (282aa)
Marine sediment metagenome DNA, contig: S12H4_C00901 {ECO:0000313|EMBL:GAI70779.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_176470_30
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

comp(22734..23963)
DNA (1230bp) protein (410aa)
Tax=RBG_16_Chloroflexi_48_7_curated
Displaying items 1-30 of 49 in total

View Taxonomy