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B_1_S1_Biohub_coassembly_k141_1407246

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1407246_1

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2..394
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S12H4_L01017 {ECO:0000313|EMBL:GAI83459.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
30S ribosomal protein S4
B_1_S1_Biohub_coassembly_k141_1407246_2
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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408..1379
DNA (972bp) protein (324aa)
DNA-directed RNA polymerase subunit alpha Tax=Dehalococcoides ethenogenes (strain 195) RepID=RPOA_DEHE1
DNA-directed RNA polymerase subunit alpha
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_1407246_3
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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1437..1790
DNA (354bp) protein (118aa)
50S ribosomal protein L17 Tax=Dehalococcoides mccartyi RepID=D2BGZ9_DEHSV
rplQ; 50S ribosomal protein L17
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_4
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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1791..2609
DNA (819bp) protein (273aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine synthase A [EC:5.4.99.12] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
tRNA pseudouridine synthase A (EC:5.4.99.12)
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1407246_5

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2606..3055
DNA (450bp) protein (150aa)
50S ribosomal protein L13 Tax=Dehalococcoides ethenogenes (strain 195) RepID=RL13_DEHE1
Marine sediment metagenome DNA, contig: S01H1_L08442 {ECO:0000313|EMBL:GAF91625.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L13
B_1_S1_Biohub_coassembly_k141_1407246_6
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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3101..3496
DNA (396bp) protein (132aa)
30S ribosomal protein S9 Tax=Thermaerobacter RepID=E4M526_9FIRM bin=RBG2 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
30S ribosomal protein S9
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_7
unknown

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4067..4456
DNA (390bp) protein (130aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1407246_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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4554..5126
DNA (573bp) protein (191aa)
Endonuclease III Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2P0_DEHLB
HhH-GPD family protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_9
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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5160..6044
DNA (885bp) protein (295aa)
LmbE family protein bin=GWB2_Chloroflexi_54_36 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
LmbE family protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_10

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6092..6778
DNA (687bp) protein (229aa)
Marine sediment metagenome DNA, contig: S01H4_S06221 {ECO:0000313|EMBL:GAG99212.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nitroreductase
B_1_S1_Biohub_coassembly_k141_1407246_11
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

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comp(7287..8264)
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R6P9_HALMT
hypothetical protein
Tax=RBG_13_Chloroflexi_52_12_curated
B_1_S1_Biohub_coassembly_k141_1407246_12
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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8718..9803
DNA (1086bp) protein (362aa)
Aminotransferase class I and II Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K092_DEHLB
class I and II aminotransferase
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_1407246_13
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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9796..11325
DNA (1530bp) protein (510aa)
Cobyric acid synthase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLC6_9FIRM
cobyric acid synthase CobQ
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_14
unknown

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11360..11920
DNA (561bp) protein (187aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1407246_15
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12181..14028
DNA (1848bp) protein (616aa)
mta:Moth_2112 ferredoxin bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ferredoxin
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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14028..14891
DNA (864bp) protein (288aa)
UniRef90_G7WGY6 Pterin binding enzyme Tax=Desulfosporosinus orientis DSM 765 RepID=G7WGY6_9FIRM bin=RBG2 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
Pterin binding enzyme
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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15220..16578
DNA (1359bp) protein (453aa)
Putative uncharacterized protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIW2_MOOTA
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1407246_18
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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16658..16867
DNA (210bp) protein (70aa)
cobalamin B12-binding domain protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
cobalamin B12-binding domain-containing protein
Tax=RBG_16_Chloroflexi_50_9_curated
Displaying 18 items

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