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B_1_S1_Biohub_coassembly_k141_5098773

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5098773_1
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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1..528
DNA (528bp) protein (176aa)
Two-component hybrid sensor and regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR3_SYMTH
two-component hybrid sensor and regulator
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_5098773_2

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521..898
DNA (378bp) protein (126aa)
Response regulator receiver protein Tax=uncultured Chloroflexi bacterium RepID=H5SBB3_9CHLR
Marine sediment metagenome DNA, contig: S06H3_S07387 {ECO:0000313|EMBL:GAI29025.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver protein
B_1_S1_Biohub_coassembly_k141_5098773_3
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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1477..3234
DNA (1758bp) protein (586aa)
dev:DhcVS_1133 type II secretion system protein; K02454 general secretion pathway protein E bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
secretion system protein E
Tax=RBG_16_Chloroflexi_50_11_curated
B_1_S1_Biohub_coassembly_k141_5098773_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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3311..4519
DNA (1209bp) protein (403aa)
Type II secretory pathway, component PulF bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type II secretion system protein F
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_5
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

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4516..4866
DNA (351bp) protein (117aa)
Tax=RBG_13_Chloroflexi_52_12_curated
B_1_S1_Biohub_coassembly_k141_5098773_6
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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4863..5324
DNA (462bp) protein (154aa)
Tfp pilus assembly protein Tax=Dehalococcoides mccartyi RepID=D2BIV0_DEHSV
pilW; type IV pilus assembly protein PilW
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5098773_7
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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5339..6343
DNA (1005bp) protein (335aa)
hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5098773_8
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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6359..6919
DNA (561bp) protein (187aa)
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5098773_9
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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6929..8371
DNA (1443bp) protein (481aa)
dev:DhcVS_1140 Tfp pilus assembly protein ATPase; K02662 type IV pilus assembly protein PilM bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
type IV pilus assembly family protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_10
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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8737..9246
DNA (510bp) protein (170aa)
def; peptide deformylase (EC:3.5.1.88)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036AB137
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(9306..10502)
DNA (1197bp) protein (399aa)
Putative subtilisin Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YY33_METPS
putative subtilisin
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_12
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(10617..11318)
DNA (702bp) protein (234aa)
hypothetical protein
Putative uncharacterized protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_13

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comp(11442..12407)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Halorubrum coriense DSM 10284 RepID=M0EW25_9EURY
Marine sediment metagenome DNA, contig: S06H3_L03580 {ECO:0000313|EMBL:GAI14922.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_5098773_14

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comp(12404..13228)
DNA (825bp) protein (275aa)
Peptidase S49 Tax=Haloterrigena limicola JCM 13563 RepID=M0CPM0_9EURY
Marine sediment metagenome DNA, contig: S03H2_S09756 {ECO:0000313|EMBL:GAH74909.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sppA; signal peptide peptidase SppA
B_1_S1_Biohub_coassembly_k141_5098773_15
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(13480..14661)
DNA (1182bp) protein (394aa)
Carboxyl-terminal protease Tax=Dehalococcoides mccartyi GY50 RepID=V5QA09_9CHLR
peptidase S41
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_16
unknown

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15439..15918
DNA (480bp) protein (160aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5098773_17
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(16138..17052)
DNA (915bp) protein (305aa)
dly:Dehly_0133 quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
quinolinate synthetase complex subunit A
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_18
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(17045..17833)
DNA (789bp) protein (263aa)
Protein FdhD homolog bin=GWC2_Syntrophus__56_31 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
formate dehydrogenase family accessory protein FdhD
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_5098773_19
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(17846..18292)
DNA (447bp) protein (149aa)
MOSC domain containing protein Tax=Methanobacterium sp. AL-21 RepID=F0T6Y6_METSL bin=RBG2 species=Methanobacterium sp. AL-21 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RBG2 organism_group=Chloroflexi
MOSC domain-containing protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5098773_20
unknown

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comp(18402..18491)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 20 items

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