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B_1_S1_Biohub_coassembly_k141_5448894

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5448894_1
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(3..806)
DNA (804bp) protein (268aa)
GGDEF domain protein Tax=Dehalococcoides sp. (strain VS) RepID=D2BIX5_DEHSV
GGDEF domain-containing protein
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_5448894_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(1098..1412)
DNA (315bp) protein (105aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5448894_3
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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1586..1885
DNA (300bp) protein (100aa)
hypothetical protein; K09764 hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_5448894_4
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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1885..4194
DNA (2310bp) protein (770aa)
deh:cbdb_A928 cbdbA928; ATP-dependent RNA helicase, DEAD; K06877 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
DEAD/DEAH box helicase
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_5448894_5
unknown

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4239..5066
DNA (828bp) protein (276aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5448894_6
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(5193..5930)
DNA (738bp) protein (246aa)
rRNA methylase, putative, group 3 Tax=Clostridium clariflavum DSM 19732 RepID=G8M394_9CLOT bin=RBG2 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
RNA methyltransferase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5448894_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(6216..7898)
DNA (1683bp) protein (561aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7W2_DEHE1
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5448894_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(7908..9167)
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Dehalococcoides sp. (strain VS) RepID=D2BI14_DEHSV
fabF; 3-oxoacyl-ACP synthase II
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5448894_9
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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9332..10600
DNA (1269bp) protein (423aa)
dev:DhcVS_835 tRNA modification enzyme, MiaB family bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
MiaB-like tRNA modifying enzyme
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5448894_10
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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10693..12726
DNA (2034bp) protein (678aa)
Uncharacterized protein Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZZZ9_DEIPD
hypothetical protein
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_5448894_11

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comp(12885..13526)
DNA (642bp) protein (214aa)
Translin Tax=Dehalococcoides mccartyi RepID=D3SIM9_DEHSG
Marine sediment metagenome DNA, contig: S06H3_S19055 {ECO:0000313|EMBL:GAI51735.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translin
B_1_S1_Biohub_coassembly_k141_5448894_12
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(13523..14575)
DNA (1053bp) protein (351aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
thiamine-phosphate pyrophosphorylase
Tax=RBG_13_Chloroflexi_56_8b_curated
Displaying 12 items

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