ggKbase home page

S_p1_S3_170907_scaffold_143899

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_170907_scaffold_143899_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.117)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036375A1
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_143899_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

510..1553
DNA (1044bp) protein (348aa)
Galactose-1-phosphate uridylyltransferase bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
galactose-1-phosphate uridylyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_143899_3

Not on your lists

1550..2137
DNA (588bp) protein (196aa)
Similar to alkaline phosphatase PhoA Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7H6_9BACT bin=ACD50 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKM82431.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_170907_scaffold_143899_4
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

2140..2877
DNA (738bp) protein (246aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
S_p1_S3_170907_scaffold_143899_5
GWA2_OD1_46_17_plus, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3045..4172
DNA (1128bp) protein (376aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000313|EMBL:KKU25884.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_46_17.;"
Phosphoglycerate kinase bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
S_p1_S3_170907_scaffold_143899_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

4222..5922
DNA (1701bp) protein (567aa)
single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recJ; single-stranded-DNA-specific exonuclease
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_143899_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5919..6368
DNA (450bp) protein (150aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036CFFF5
ribonuclease H
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
S_p1_S3_170907_scaffold_143899_8
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(6370..6636)
DNA (267bp) protein (89aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
S_p1_S3_170907_scaffold_143899_9
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6665..7057)
DNA (393bp) protein (131aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
S_p1_S3_170907_scaffold_143899_10
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(7054..7398)
DNA (345bp) protein (115aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
membrane protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
Displaying 10 items

View Taxonomy