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S_p65_S5_coassembly_k141_2675475

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p65_S5_coassembly_k141_2675475_1
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

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comp(243..3524)
DNA (3282bp) protein (1094aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKR85933.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
Protein translocase subunit SecA bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Preprotein translocase subunit SecA
S_p65_S5_coassembly_k141_2675475_2
R_OD1_Uhrbacteria_63_20, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3503..4699)
DNA (1197bp) protein (399aa)
methyltransferase type 12; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
SAM-dependent methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Uhrbacteria_63_20_curated
S_p65_S5_coassembly_k141_2675475_3
RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated, Uhrbacteria, Parcubacteria, Bacteria

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comp(4705..5052)
DNA (348bp) protein (116aa)
Uncharacterized protein DR_1082 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S30
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated
S_p65_S5_coassembly_k141_2675475_4
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5122..6090)
DNA (969bp) protein (323aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000313|EMBL:KKR97402.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
S_p65_S5_coassembly_k141_2675475_5
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

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comp(6185..7552)
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:KKR86158.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
UDP-N-acetylmuramate--L-alanine ligase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramate/alanine ligase
S_p65_S5_coassembly_k141_2675475_6
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

7667..8971
DNA (1305bp) protein (435aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000313|EMBL:KKR86163.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
Serine hydroxymethyltransferase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
S_p65_S5_coassembly_k141_2675475_7

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8990..9565
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7X2_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KKS92384.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
hypothetical protein
S_p65_S5_coassembly_k141_2675475_8
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9578..10459)
DNA (882bp) protein (294aa)
Deoxyribonuclease, TatD family {ECO:0000313|EMBL:KKR97413.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
Hydrolase, tatD family bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hydrolase, TatD family
S_p65_S5_coassembly_k141_2675475_9
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10470..10976)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR86169.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
Colicin V production protein bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
S_p65_S5_coassembly_k141_2675475_10
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(10983..12494)
DNA (1512bp) protein (504aa)
Methionine-tRNA ligase {ECO:0000313|EMBL:KKR97415.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
Methionine--tRNA ligase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
methionyl-tRNA synthetase
S_p65_S5_coassembly_k141_2675475_11
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12540..13238)
DNA (699bp) protein (233aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000313|EMBL:KKR97417.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
Ribosomal RNA small subunit methyltransferase I bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Ribosomal RNA small subunit methyltransferase I
S_p65_S5_coassembly_k141_2675475_12
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13321..14454)
DNA (1134bp) protein (378aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR85899.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
S_p65_S5_coassembly_k141_2675475_13
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(14461..14943)
DNA (483bp) protein (161aa)
bcp-1; bacterioferritin comigratory protein, thiol peroxidase, putative; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
redoxin domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
S_p65_S5_coassembly_k141_2675475_14
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15027..15248)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F614_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
S_p65_S5_coassembly_k141_2675475_15
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

15541..16365
DNA (825bp) protein (275aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR85895.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
hypothetical protein; K09807 hypothetical protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
S_p65_S5_coassembly_k141_2675475_16
unknown

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16417..16683
DNA (267bp) protein (89aa)

This feature has no annotations

S_p65_S5_coassembly_k141_2675475_17
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

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comp(16743..17075)
DNA (333bp) protein (111aa)
hypothetical protein bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
S_p65_S5_coassembly_k141_2675475_18
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17242..18000)
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR86644.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
coiled-coil 186..207 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
S_p65_S5_coassembly_k141_2675475_19
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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18809..19042
DNA (234bp) protein (78aa)
Transposase IS200-like Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XV6_RHOPB
Transposase {ECO:0000313|EMBL:KIF23874.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
transposase IS200-like
Displaying 19 items

View Taxonomy