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S5_GD2017_2_S2_scaffold_1003

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_1003_1

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comp(1..447)
DNA (447bp) protein (149aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46772.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_1003_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

827..1762
DNA (936bp) protein (312aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase Tax=uncultured Desulfobacterium sp. RepID=E1YJX1_9DELT
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
S5_GD2017_2_S2_scaffold_1003_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

1845..2402
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S5_GD2017_2_S2_scaffold_1003_4
Neospora caninum, Neospora, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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2565..2957
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=Neospora caninum (strain Liverpool) RepID=F0VHM4_NEOCL
Uncharacterized protein {ECO:0000313|EMBL:CBZ53235.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora.;" source="Neospora caninum (strain Liverpool).;"
S5_GD2017_2_S2_scaffold_1003_5
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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3281..3967
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Eggerthella sp. CAG:298 RepID=R7B6W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD59591.1}; species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
S5_GD2017_2_S2_scaffold_1003_6
unknown

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3936..4265
DNA (330bp) protein (110aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4475..4750
DNA (276bp) protein (92aa)
Putative iron sulfur domain-containing protein, CDGSH-type Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKH0_NITGG
iron sulfur domain-containing protein, CDGSH-type
Putative iron sulfur domain-containing protein, CDGSH-type {ECO:0000313|EMBL:AFU59758.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S5_GD2017_2_S2_scaffold_1003_8

Not on your lists

4945..5760
DNA (816bp) protein (272aa)
Marine sediment metagenome DNA, contig: S01H1_S05363 {ECO:0000313|EMBL:GAG03789.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Pyrroline-5-carboxylate reductase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
proC; pyrroline-5-carboxylate reductase
S5_GD2017_2_S2_scaffold_1003_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6064..7719)
DNA (1656bp) protein (552aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
adenylosuccinate lyase
Tax=AR11
S5_GD2017_2_S2_scaffold_1003_10
unknown

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comp(7834..8457)
DNA (624bp) protein (208aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_11
unknown

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comp(8525..8737)
DNA (213bp) protein (71aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_12
unknown

Not on your lists

comp(8835..9635)
DNA (801bp) protein (267aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_13
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(9647..10399)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719623
zinc/iron permease
Tax=AR5
S5_GD2017_2_S2_scaffold_1003_14
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10678..11685)
DNA (1008bp) protein (336aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00037ACC1E
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
S5_GD2017_2_S2_scaffold_1003_15
R_OD1_Kaiserbacteria_59_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11915..12574)
DNA (660bp) protein (220aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE Tax=Haloferax larsenii JCM 13917 RepID=M0GTE4_9EURY
ubiquinone/menaquinone biosynthesis methyltransferase UbiE
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_59_21_curated
S5_GD2017_2_S2_scaffold_1003_16
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12764..13036
DNA (273bp) protein (91aa)
10 kDa chaperonin Tax=Methanohalophilus portucalensis RepID=A3QPW6_9EURY
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
chaperonin Cpn10
S5_GD2017_2_S2_scaffold_1003_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

13036..14733
DNA (1698bp) protein (566aa)
60 kDa chaperonin bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Heat shock protein 60 family chaperone GroEL
Tax=CG_Woesearch_01
S5_GD2017_2_S2_scaffold_1003_18
unknown

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comp(14871..15230)
DNA (360bp) protein (120aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_19
unknown

Not on your lists

15557..15703
DNA (147bp) protein (49aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15715..16011
DNA (297bp) protein (99aa)
Tax=AR11
S5_GD2017_2_S2_scaffold_1003_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15981..17108
DNA (1128bp) protein (376aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S5_GD2017_2_S2_scaffold_1003_22
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17232..18527)
DNA (1296bp) protein (432aa)
YD repeat protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0ULS3_CYAP2
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ADN17903.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
S5_GD2017_2_S2_scaffold_1003_23
unknown

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18626..18976
DNA (351bp) protein (117aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_24

Not on your lists

comp(19167..24062)
DNA (4896bp) protein (1632aa)
Putative uncharacterized protein Tax=uncultured archaeon MedDCM-OCT-S04-C140 RepID=D6PB71_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF16150.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_72_H01.;"
S5_GD2017_2_S2_scaffold_1003_25
unknown

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comp(24167..25219)
DNA (1053bp) protein (351aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_26

Not on your lists

25516..26001
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S12H4_L00617 {ECO:0000313|EMBL:GAI78131.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5044624 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S5_GD2017_2_S2_scaffold_1003_27
AR4, Woesearchaeaota, DPANN, Archaea

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26127..26657
DNA (531bp) protein (177aa)
id=5044624 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S5_GD2017_2_S2_scaffold_1003_28
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

26688..26903
DNA (216bp) protein (72aa)
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_03
S5_GD2017_2_S2_scaffold_1003_29
unknown

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26956..27114
DNA (159bp) protein (53aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1003_30
unknown

Not on your lists

27139..27705
DNA (567bp) protein (189aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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