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S5_GD2017_2_S2_scaffold_5170

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_5170_1
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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comp(1..1320)
DNA (1320bp) protein (440aa)
Smc; chromosome segregation ATPase; K03529 chromosome segregation protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation protein SMC
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_5170_2

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comp(1342..2268)
DNA (927bp) protein (309aa)
transmembrane_regions 7..29 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD32941.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S5_GD2017_2_S2_scaffold_5170_3
unknown

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2342..2671
DNA (330bp) protein (110aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_4
unknown

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2698..3279
DNA (582bp) protein (194aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_5
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

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comp(3317..4351)
DNA (1035bp) protein (345aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036AAF4B
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
S5_GD2017_2_S2_scaffold_5170_6
unknown

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comp(4472..4915)
DNA (444bp) protein (148aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_7
unknown

Not on your lists

comp(4951..5094)
DNA (144bp) protein (48aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_8
unknown

Not on your lists

comp(5159..5362)
DNA (204bp) protein (68aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_9
unknown

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comp(5592..5816)
DNA (225bp) protein (75aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_10
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6058..8919)
DNA (2862bp) protein (954aa)
ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria)
nrdA; ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1)
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
S5_GD2017_2_S2_scaffold_5170_11
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(8955..9611)
DNA (657bp) protein (219aa)
prx-1; peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] bin=AR5_curated_draft species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
S5_GD2017_2_S2_scaffold_5170_trna_1
unknown

Not on your lists

10110..10181
DNA (72bp)
transferRNA Arg
S5_GD2017_2_S2_scaffold_5170_12
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

10170..11216
DNA (1047bp) protein (349aa)
PHP domain protein Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHI8_9FIRM
PHP family metal-dependent phosphoesterase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
S5_GD2017_2_S2_scaffold_5170_13

Not on your lists

comp(11256..11486)
DNA (231bp) protein (77aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003804B2F
Uncharacterized protein {ECO:0000313|EMBL:KKS55782.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_5170_14

Not on your lists

comp(11483..11704)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS33852.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
S5_GD2017_2_S2_scaffold_5170_15
unknown

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comp(11831..12298)
DNA (468bp) protein (156aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5170_16
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(12378..12866)
DNA (489bp) protein (163aa)
bacterioferritin comigratory protein, thiol peroxidase, putative; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S5_GD2017_2_S2_scaffold_5170_17
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

12946..13158
DNA (213bp) protein (71aa)
Uncharacterized protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFOXYD2_FULL_OD1_52_8_curated
Displaying 18 items

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