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S5_GD2017_2_S2_scaffold_5767

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_5767_1
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3..833
DNA (831bp) protein (277aa)
Tax=CG_Nomura_04
S5_GD2017_2_S2_scaffold_5767_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

842..2779
DNA (1938bp) protein (646aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW18_9BACT
replication restart DNA helicase PriA
Tax=CG_Nomura_04
S5_GD2017_2_S2_scaffold_5767_3
GWB1_OD1_40_7, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2928..3488
DNA (561bp) protein (187aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000313|EMBL:KKR69815.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_7.;"
S5_GD2017_2_S2_scaffold_5767_4
Actinobacillus equuli, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3530..3946)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D2DCFC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIZ79731.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus equuli subsp. equuli.;"
S5_GD2017_2_S2_scaffold_5767_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4104..4652)
DNA (549bp) protein (183aa)
Repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX) Tax=uncultured bacterium RepID=K2EYU1_9BACT
PaaX family transcriptional regulator
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
S5_GD2017_2_S2_scaffold_5767_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4816..5061)
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
S5_GD2017_2_S2_scaffold_5767_7
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

5133..5987
DNA (855bp) protein (285aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
S5_GD2017_2_S2_scaffold_5767_8
unknown

Not on your lists

comp(5970..6299)
DNA (330bp) protein (110aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5767_9
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6317..6679)
DNA (363bp) protein (121aa)
Ribosomal protein S30Ae/sigma 54 modulation protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=CG_Nomura_01
S5_GD2017_2_S2_scaffold_5767_trna_2
unknown

Not on your lists

comp(6727..6800)
DNA (74bp)
transferRNA Phe
S5_GD2017_2_S2_scaffold_5767_10
RIFOXYD1_FULL_RIF_OD1_10_39_35_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(6902..7147)
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tax=RIFOXYD1_FULL_RIF_OD1_10_39_35_curated
S5_GD2017_2_S2_scaffold_5767_11
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

7226..8080
DNA (855bp) protein (285aa)
tetrahydrofolate dehydrogenase/cyclohydrolase domain-containing protein (EC:3.5.4.9)
Bifunctional protein FolD bin=GWF2_Firmicute_51_9 species=Thiovulum sp. ES genus=Thiovulum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
S5_GD2017_2_S2_scaffold_5767_12
unknown

Not on your lists

comp(8133..8876)
DNA (744bp) protein (248aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5767_trna_1
unknown

Not on your lists

comp(8926..8997)
DNA (72bp)
transferRNA Arg
S5_GD2017_2_S2_scaffold_5767_13
R_RIF_OD1_09_43_27, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(9032..9337)
DNA (306bp) protein (102aa)
Glutaredoxin-like protein, YruB-family Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYE9_9BACT
alkyl hydroperoxide reductase, large subunit
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_43_27_curated
S5_GD2017_2_S2_scaffold_5767_14
RHI_OD1_Kaiserbacteria_53_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9359..10003)
DNA (645bp) protein (215aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] bin=OD1_GWC2_34_28 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase
Tax=RIFCSPHIGHO2_12_FULL_OD1_Kaiserbacteria_53_13_curated
S5_GD2017_2_S2_scaffold_5767_15
unknown

Not on your lists

comp(10074..10379)
DNA (306bp) protein (102aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5767_16
R_OD1_Nomurabacteria_40_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10406..10627)
DNA (222bp) protein (74aa)
hypothetical protein; K09131 hypothetical protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein CPn_0497//CPj0497/CpB0517
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_15_curated
S5_GD2017_2_S2_scaffold_5767_17
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(10647..12062)
DNA (1416bp) protein (472aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1K6_HALOH
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_5767_18
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12123..13793)
DNA (1671bp) protein (557aa)
ilvB; acetolactate synthase 3 catalytic subunit (EC:2.2.1.6)
thiamine pyrophosphate-binding protein Tax=Sporolactobacillus inulinus RepID=UPI000255BCE8
Uncharacterized protein {ECO:0000313|EMBL:KKA38296.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
Displaying 20 items

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