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S5_GD2017_2_S2_scaffold_894

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_894_1
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
Toxin-antitoxin system, antitoxin component, Xre family bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S5_GD2017_2_S2_scaffold_894_2
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(290..607)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ87986.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
S5_GD2017_2_S2_scaffold_894_3
RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(722..2746)
DNA (2025bp) protein (675aa)
Sodium/hydrogen exchanger Tax=Methylomonas methanica (strain MC09) RepID=G0A3E7_METMM
sodium/hydrogen exchanger
Tax=RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated
S5_GD2017_2_S2_scaffold_894_4
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2983..3204)
DNA (222bp) protein (74aa)
id=3736974 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
S5_GD2017_2_S2_scaffold_894_5
R_RIF_OD1_10_39_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3191..3835)
DNA (645bp) protein (215aa)
hypothetical protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
putative membrane protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_19_curated
S5_GD2017_2_S2_scaffold_894_6

Not on your lists

comp(4089..4805)
DNA (717bp) protein (239aa)
Na+/Ca+ antiporter, CaCA family {ECO:0000313|EMBL:KKS34399.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
Na+/Ca+ antiporter, CaCA family; K07301 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
sodium:proton exchanger
S5_GD2017_2_S2_scaffold_894_7
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(4820..5245)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2B5J7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
S5_GD2017_2_S2_scaffold_894_8
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5267..5800)
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
S5_GD2017_2_S2_scaffold_894_9
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

comp(5797..6741)
DNA (945bp) protein (315aa)
Glycosyl hydrolase BNR repeat-containing glycosyl hydrolase Tax=uncultured bacterium RepID=K2GQ56_9BACT
BNR/Asp-box repeat protein
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
S5_GD2017_2_S2_scaffold_894_10
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6863..7219)
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
S5_GD2017_2_S2_scaffold_894_11
GWA2_OD1_38_13, Parcubacteria, Bacteria

Not on your lists

comp(7246..10419)
DNA (3174bp) protein (1058aa)
Putative silver efflux pump Tax=Magnetospirillum sp. SO-1 RepID=M2ZXC4_9PROT
Cation efflux system protein, AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:KKQ55266.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
multidrug transporter AcrB
S5_GD2017_2_S2_scaffold_894_12
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10527..12212)
DNA (1686bp) protein (562aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S5_GD2017_2_S2_scaffold_894_13
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(12290..12709)
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
S5_GD2017_2_S2_scaffold_894_14
unknown

Not on your lists

comp(12792..13310)
DNA (519bp) protein (173aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_894_15
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13491..14750)
DNA (1260bp) protein (420aa)
DEAD/DEAH box helicase domain protein bin=GWC1_OD1_38_17 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ATP-dependent RNA helicase RhlE
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
S5_GD2017_2_S2_scaffold_894_16
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14955..16097
DNA (1143bp) protein (381aa)
Aminomethyltransferase bin=GWA2_Ignavibacteria_55_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
gcvT; glycine cleavage system aminomethyltransferase T
Tax=RBG_16_Ignavibacteria_36_9_curated
S5_GD2017_2_S2_scaffold_894_17
GWC1_OD1_36_9, Parcubacteria, Bacteria

Not on your lists

comp(16147..18939)
DNA (2793bp) protein (931aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0P3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ19218.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_9.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_894_18
unknown

Not on your lists

comp(18945..19310)
DNA (366bp) protein (122aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_894_19
RLO_OD1_Kaiserbacteria_50_28, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19313..20032)
DNA (720bp) protein (240aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ccdA; cytochrome c-type biogenesis protein CcdA
Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_50_28_curated
S5_GD2017_2_S2_scaffold_894_20
CG_Moran_01, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20034..20654)
DNA (621bp) protein (207aa)
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=CG_Moran_01
S5_GD2017_2_S2_scaffold_894_21
unknown

Not on your lists

comp(20822..22393)
DNA (1572bp) protein (524aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_894_22
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22498..22704)
DNA (207bp) protein (69aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
S5_GD2017_2_S2_scaffold_894_23
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22812..23207)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XFZ9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
S5_GD2017_2_S2_scaffold_894_24
GWA2_OD1_42_18, Parcubacteria, Bacteria

Not on your lists

comp(23297..23719)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS45421.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_18.;"
S5_GD2017_2_S2_scaffold_894_25
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(23724..27341)
DNA (3618bp) protein (1206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS47128.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;"
acetyltransferases and hydrolases with the alpha/beta hydrolase fold bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
parallel beta-helix repeat-containing protein
S5_GD2017_2_S2_scaffold_894_26
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(27497..28759)
DNA (1263bp) protein (421aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; K00520 mercuric reductase [EC:1.16.1.1] bin=bin1_lowGC species=Arcticibacter svalbardensis genus=Arcticibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Tax=CSP1_2_Dadabacteria
Displaying 26 items

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