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S5_GD2017_2_S2_scaffold_1197

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_1197_1
unknown

Not on your lists

2..442
DNA (441bp) protein (147aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_2
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

665..3091
DNA (2427bp) protein (809aa)
dba:Dbac_0212 phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
phosphoenolpyruvate synthase (EC:2.7.9.2)
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_1197_3
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

3146..3415
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT37687.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
id=2136345 bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
S5_GD2017_2_S2_scaffold_1197_4
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3408..3749
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Methanolinea tarda NOBI-1 RepID=G6FM89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR79684.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_1197_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4047..5273
DNA (1227bp) protein (409aa)
Eno; enolase; K01689 enolase [EC:4.2.1.11] bin=OD1_GWC2_34_28 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Eno; enolase
Tax=CG_Nomura_04
S5_GD2017_2_S2_scaffold_1197_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5411..6868)
DNA (1458bp) protein (486aa)
Putative Phosphate starvation-inducible protein PhoH-like Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T3R5_META2
phosphate starvation-inducible protein PhoH
Putative Phosphate starvation-inducible protein PhoH-like {ECO:0000313|EMBL:CCE24871.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
S5_GD2017_2_S2_scaffold_1197_7
unknown

Not on your lists

comp(7030..7629)
DNA (600bp) protein (200aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_8
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7631..8926)
DNA (1296bp) protein (432aa)
proline aminopeptidase P II Tax=Methylosarcina fibrata RepID=UPI00036DD071
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EIC31318.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
peptidase M24
S5_GD2017_2_S2_scaffold_1197_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9066..10079
DNA (1014bp) protein (338aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] bin=OD1_GWC2_34_28 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Lactate dehydrogenase and related dehydrogenase
Tax=CG_Nomura_04
S5_GD2017_2_S2_scaffold_1197_10
unknown

Not on your lists

10189..10449
DNA (261bp) protein (87aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_11
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

10545..11948
DNA (1404bp) protein (468aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
S5_GD2017_2_S2_scaffold_1197_12
unknown

Not on your lists

12001..12396
DNA (396bp) protein (132aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_13

Not on your lists

12562..13296
DNA (735bp) protein (245aa)
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKR31847.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
PaaX family transcriptional regulator
S5_GD2017_2_S2_scaffold_1197_14
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

13474..14511
DNA (1038bp) protein (346aa)
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glyceraldehyde-3-phosphate dehydrogenase, type I
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_1197_15
unknown

Not on your lists

comp(14558..14695)
DNA (138bp) protein (46aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_16
R_RIF_OD1_09_43_27, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

14786..15289
DNA (504bp) protein (168aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363FB2C
ribose-5-phosphate isomerase B
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_43_27_curated
S5_GD2017_2_S2_scaffold_1197_17

Not on your lists

15346..16017
DNA (672bp) protein (224aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKR47356.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
S5_GD2017_2_S2_scaffold_1197_18
unknown

Not on your lists

16014..16481
DNA (468bp) protein (156aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_19
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

16487..17386
DNA (900bp) protein (300aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Transketolase protein
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
S5_GD2017_2_S2_scaffold_1197_20
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(17570..18055)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVS0_9BACT
membrane protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
S5_GD2017_2_S2_scaffold_1197_21
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(18197..20149)
DNA (1953bp) protein (651aa)
RNAse R (EC:3.1.-.-)
ribonuclease R Tax=Anaerophaga thermohalophila RepID=UPI000237C4FE
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
S5_GD2017_2_S2_scaffold_1197_22
unknown

Not on your lists

comp(20250..20789)
DNA (540bp) protein (180aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_23
unknown

Not on your lists

21188..21730
DNA (543bp) protein (181aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_24
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

21961..23043
DNA (1083bp) protein (361aa)
Redoxin domain protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWK9_9ARCH
cytochrome C biogenesis protein
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_1197_trna_1
unknown

Not on your lists

23056..23129
DNA (74bp)
transferRNA Val
S5_GD2017_2_S2_scaffold_1197_25
unknown

Not on your lists

23200..23724
DNA (525bp) protein (175aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1197_trna_2
unknown

Not on your lists

23809..23879
DNA (71bp)
transferRNA Ala
S5_GD2017_2_S2_scaffold_1197_26
R_RIF_OD1_13_49_20, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

23953..24213
DNA (261bp) protein (87aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_20_curated
S5_GD2017_2_S2_scaffold_1197_27
RHI_OD1_Yanofskybacteria_45_19b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

24188..24520
DNA (333bp) protein (111aa)
hypothetical protein bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPHIGHO2_12_FULL_OD1_Yanofskybacteria_45_19b_curated
S5_GD2017_2_S2_scaffold_1197_28

Not on your lists

24780..26339
DNA (1560bp) protein (520aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FGV3_9BACT
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:KKT41302.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
multidrug ABC transporter ATPase
Displaying items 1-30 of 34 in total

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