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S5_GD2017_2_S2_scaffold_2427

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_2427_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

3..917
DNA (915bp) protein (305aa)
Strongly similar to membrane-bound [NiFe]-hydrogenase-4, subunit F bin=GWF2_Lentisphaerae_38_69 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hyfF; hydrogenase 4, membrane subunit
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
S5_GD2017_2_S2_scaffold_2427_2
GWA2_OD1_56_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1068..1646
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z3F2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW42501.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_56_11.;"
Ni,Fe-hydrogenase III large subunit
S5_GD2017_2_S2_scaffold_2427_3
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1741..2589
DNA (849bp) protein (283aa)
putative formate hydrogenlyase large subunit (EC:1.12.7.2)
Putative Formate hydrogenlyase, large subunit bin=GWF2_Lentisphaerae_38_69 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
S5_GD2017_2_S2_scaffold_2427_4
GWE2_OD1_36_40, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2757..4010
DNA (1254bp) protein (418aa)
tvo:TVN0760 glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase {ECO:0000313|EMBL:KKQ04930.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_36_40.;"
S5_GD2017_2_S2_scaffold_2427_5
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

4019..5353
DNA (1335bp) protein (445aa)
Glucose-6-phosphate isomerase Tax=uncultured bacterium RepID=K2CZ24_9BACT
pgi; Glucose-6-phosphate isomerase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
S5_GD2017_2_S2_scaffold_2427_6
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5384..5794
DNA (411bp) protein (137aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI000369CBF0
Uncharacterized protein {ECO:0000313|EMBL:EHL04106.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_2427_7
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

5805..6620
DNA (816bp) protein (272aa)
Putative glucokinase Tax=Methylocystis sp. (strain SC2) RepID=J7QH20_METSZ
glucokinase
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
S5_GD2017_2_S2_scaffold_2427_8
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

6808..8013
DNA (1206bp) protein (402aa)
queuine tRNA-ribosyltransferase (TGT); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_2427_9
unknown

Not on your lists

8116..8421
DNA (306bp) protein (102aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_2427_10
unknown

Not on your lists

8479..8706
DNA (228bp) protein (76aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_2427_11
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

8770..10779
DNA (2010bp) protein (670aa)
UvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UvrB; excinuclease ABC subunit B
Tax=RIFOXYC2_FULL_RIF_OD1_09_47_9_curated
S5_GD2017_2_S2_scaffold_2427_12
GWF2_OD1_35_39, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

10827..11507
DNA (681bp) protein (227aa)
N-6 DNA methylase bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKP79785.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_39.;"
S5_GD2017_2_S2_scaffold_2427_13
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


11566..13344
DNA (1779bp) protein (593aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
alanyl-tRNA synthetase AlaRS (EC:6.1.1.7)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
S5_GD2017_2_S2_scaffold_2427_14

Not on your lists

13344..13970
DNA (627bp) protein (209aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000313|EMBL:KKW17044.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
S5_GD2017_2_S2_scaffold_2427_15
R_OD1_Moranbacteria_55_24, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14113..14973
DNA (861bp) protein (287aa)
HhH-GPD family protein Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5U9_DESIS
HhH-GPD family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_55_24_curated
S5_GD2017_2_S2_scaffold_2427_16
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


14986..16224
DNA (1239bp) protein (413aa)
putative prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] bin=OD1_GWC2_34_28 species=Turicibacter sanguinis genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Prolyl-tRNA synthetase
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
S5_GD2017_2_S2_scaffold_2427_17
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(16339..17715)
DNA (1377bp) protein (459aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9P2Z5_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
S5_GD2017_2_S2_scaffold_2427_18
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

17807..18862
DNA (1056bp) protein (352aa)
id=5226932 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
S5_GD2017_2_S2_scaffold_2427_19
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

18883..19680
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR53862.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
Rod shape-determining protein MreC bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
S5_GD2017_2_S2_scaffold_2427_20
GWB1_OD1_47_6_part, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19842..20120
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU75316.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_47_6.;"
S5_GD2017_2_S2_scaffold_2427_21
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20125..21846
DNA (1722bp) protein (574aa)
penicillin-binding protein 2; K05515 penicillin-binding protein 2 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative penicillin-binding protein
Tax=CG_Nomura_01
S5_GD2017_2_S2_scaffold_2427_22
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

21900..22367
DNA (468bp) protein (156aa)
hypothetical protein Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000376D45F
UV radiation resistance and autophagy-related subunit 14 family protein
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
S5_GD2017_2_S2_scaffold_2427_23
unknown

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22360..22482
DNA (123bp) protein (41aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_2427_24
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

22504..23481
DNA (978bp) protein (326aa)
transketolase; K00615 transketolase [EC:2.2.1.1] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
transketolase
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
S5_GD2017_2_S2_scaffold_2427_25
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

23493..23876
DNA (384bp) protein (128aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
vanR2; regulatory protein VanR
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
S5_GD2017_2_S2_scaffold_2427_26
unknown

Not on your lists

23890..24510
DNA (621bp) protein (207aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_2427_27
R_OD1_46_25, Parcubacteria, Bacteria

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24546..26810
DNA (2265bp) protein (755aa)
Fibronectin type III domain protein bin=GWC2_Nitrospirae_57_13 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
1,4-beta cellobiohydrolase
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Displaying 27 items

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