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S5_GD2017_2_S2_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_46_1
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

381..800
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
S5_GD2017_2_S2_scaffold_46_2
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

803..1594
DNA (792bp) protein (264aa)
UPI0003CF7B63 related cluster Tax=unknown RepID=UPI0003CF7B63
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
S5_GD2017_2_S2_scaffold_46_3
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1611..1790)
DNA (180bp) protein (60aa)
hypothetical protein bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
S5_GD2017_2_S2_scaffold_46_4
R_OP11_Curtissbacteria_42_15, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(1797..3983)
DNA (2187bp) protein (729aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZJX8_9BACT
type III restriction protein res subunit
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_42_15_curated
S5_GD2017_2_S2_scaffold_46_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3980..5608)
DNA (1629bp) protein (543aa)
Type III restriction-modification system StyLTI enzyme mod Tax=Sulfurimonas gotlandica GD1 RepID=B6BM43_9HELI
methyltransferase
Tax=CG_Woesearch_01
S5_GD2017_2_S2_scaffold_46_6
R_OP11_Woesebacteria_44_14, Woesebacteria, Microgenomates, Bacteria

Not on your lists

5682..6878
DNA (1197bp) protein (399aa)
hypothetical protein bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_14_curated
S5_GD2017_2_S2_scaffold_46_7
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7005..7259
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ETT4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR52177.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWD2_40_19.;"
S5_GD2017_2_S2_scaffold_46_8
CG_Gottesman_01, Gottesmanbakteria, Microgenomates, Bacteria

Not on your lists

7246..7437
DNA (192bp) protein (64aa)
hypothetical protein
hypothetical protein bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=CG_Gottesman_01
S5_GD2017_2_S2_scaffold_46_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

7385..8692
DNA (1308bp) protein (436aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
S5_GD2017_2_S2_scaffold_46_10
CG_Gottesman_01, Gottesmanbakteria, Microgenomates, Bacteria

Not on your lists

8709..10325
DNA (1617bp) protein (539aa)
Resolvase domain Tax=mine drainage metagenome RepID=E6QWS7_9ZZZZ bin=ACD51 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
recombinase
Tax=CG_Gottesman_01
S5_GD2017_2_S2_scaffold_46_trna_2
unknown

Not on your lists

comp(10293..10363)
DNA (71bp)
transferRNA Gln
S5_GD2017_2_S2_scaffold_46_11
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(10349..10627)
DNA (279bp) protein (93aa)
Excinuclease abc c subunit domain protein Tax=Melioribacter roseus (strain P3M) RepID=I7A6E5_MELRP
excinuclease abc c subunit domain protein
Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
S5_GD2017_2_S2_scaffold_46_12
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(10747..11103)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DSW8_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_13
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11141..12595)
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase Tax=uncultured bacterium RepID=K2D8F1_9BACT
glutamyl/glutaminyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_14
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12617..13654
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CVG8_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_15
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13629..14549)
DNA (921bp) protein (307aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CVX1_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_16
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(14563..15909)
DNA (1347bp) protein (449aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CAJ5_9BACT
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S5_GD2017_2_S2_scaffold_46_17
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16118..17467
DNA (1350bp) protein (450aa)
trpE; anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate/para-aminobenzoate synthase component 1 {ECO:0000313|EMBL:KKQ77286.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
anthranilate synthase component I bin=GWA2_OP3_52_12 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
S5_GD2017_2_S2_scaffold_46_18
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17464..18054
DNA (591bp) protein (197aa)
Glutamine amidotransferase of anthranilate synthase bin=GWA2_OP3_52_12 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
glutamine amidotransferase of anthranilate synthase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S5_GD2017_2_S2_scaffold_46_19
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

18228..19049
DNA (822bp) protein (274aa)
Anthranilate phosphoribosyltransferase bin=GWA2_OP3_52_12 species=unknown genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
anthranilate phosphoribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S5_GD2017_2_S2_scaffold_46_20
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19039..20367
DNA (1329bp) protein (443aa)
Anthranilate synthase component 2 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXZ5_SCHJY bin=ACD65 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
trp1; Indole-3-glycerol-phosphate synthase, phosphoribosylanthranilate isomerase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S5_GD2017_2_S2_scaffold_46_21
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

20364..21581
DNA (1218bp) protein (406aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Frankia sp. CN3 RepID=G6H8F2_9ACTO
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
S5_GD2017_2_S2_scaffold_46_22
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

21574..22353
DNA (780bp) protein (260aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=uncultured bacterium RepID=K2DGK0_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
S5_GD2017_2_S2_scaffold_46_23
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

22367..24223
DNA (1857bp) protein (619aa)
transketolase (EC:2.2.1.1)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CG45_9BACT
Tax=RBG_13_Nitrospirae_39_12_curated
S5_GD2017_2_S2_scaffold_46_24
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

24393..25457
DNA (1065bp) protein (355aa)
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Desulfitobacterium sp. PCE1 RepID=UPI00037CEE8C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_25
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25457..26524
DNA (1068bp) protein (356aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SD13_PEDSD
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_26
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

26528..28330
DNA (1803bp) protein (601aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWA2_OP3_52_12 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_27
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28327..29127
DNA (801bp) protein (267aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
shikimate 5-dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_28
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

29124..29804
DNA (681bp) protein (227aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
Putative 3-dehydroquinate dehydratase/shikimate dehydrogenase Tax=Fagus sylvatica RepID=Q30D00_FAGSY bin=ACD51 species=Fagus sylvatica genus=Fagus taxon_order=Fagales taxon_class=unknown phylum=Streptophyta tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S5_GD2017_2_S2_scaffold_46_29
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

Not on your lists

29804..30889
DNA (1086bp) protein (362aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase bin=GWA2_OP3_52_12 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
Displaying items 1-30 of 152 in total

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