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GD18-4_B1_scaffold_44781

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_44781_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..395
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9M9_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL67417.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
GD18-4_B1_scaffold_44781_2
unknown

Not on your lists

536..1636
-----------------
DNA (1101bp)
protein (367aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..3023)
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPA4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34992.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3186..3557
-----------------
DNA (372bp)
protein (124aa)
Response regulator receiver protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WX97_KYRT2
response regulator receiver protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_44781_5
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3750..5216
-----------------
DNA (1467bp)
protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6SZP8_9BACI
kinE; PAS two-component sensor histidine kinase
GD18-4_B1_scaffold_44781_6
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5236..6102
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R0I0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14848.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
GD18-4_B1_scaffold_44781_7
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6187..6465
-----------------
DNA (279bp)
protein (93aa)
YCII-related n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JC85_ANAD2
YciI-like protein {ECO:0000313|EMBL:GAO05132.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
YciI-like protein
GD18-4_B1_scaffold_44781_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6518..7459
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZ29_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37591.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_9

Not on your lists

7456..8646
-----------------
DNA (1191bp)
protein (397aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SPT3_9DELT
Marine sediment metagenome DNA, contig: S01H1_L06609 {ECO:0000313|EMBL:GAF78704.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
EGF domain-containing protein
GD18-4_B1_scaffold_44781_10
unknown

Not on your lists

8788..10335
-----------------
DNA (1548bp)
protein (516aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_11
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10430..12262
-----------------
DNA (1833bp)
protein (611aa)
Putative serine/threonine protein kinase n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UCH1_9ACTO
Putative serine/threonine protein kinase {ECO:0000313|EMBL:GAB43429.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
Ser/Thr protein kinase
GD18-4_B1_scaffold_44781_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12292..12705)
-----------------
DNA (414bp)
protein (138aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1Q4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38704.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12710..14647)
-----------------
DNA (1938bp)
protein (646aa)
Inner membrane protein YqiK n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ASE9_9CAUL
TolA protein {ECO:0000313|EMBL:AKF11371.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
yqiK; inner membrane protein YqiK
GD18-4_B1_scaffold_44781_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14814..15506)
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZMA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKF11370.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Proline--tRNA ligase
GD18-4_B1_scaffold_44781_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15731..17005
-----------------
DNA (1275bp)
protein (425aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YB79_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42129.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_16
unknown

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comp(17013..17258)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17291..18592)
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZS4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37959.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18594..20171)
-----------------
DNA (1578bp)
protein (526aa)
Dioxygenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIH2_SORCE
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AGP32356.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_44781_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20260..21870
-----------------
DNA (1611bp)
protein (537aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ20_HALO1
Uncharacterized protein {ECO:0000313|EMBL:AKF09961.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_44781_20
unknown

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comp(22072..22704)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_21
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22838..24247
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZN6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIG16080.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
GD18-4_B1_scaffold_44781_22
unknown

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comp(24296..24991)
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25010..27301)
-----------------
DNA (2292bp)
protein (764aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Glutamine--tRNA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC60_SORCE
hypothetical protein
GD18-4_B1_scaffold_44781_24
unknown

Not on your lists

27403..28047
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

GD18-4_B1_scaffold_44781_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28113..29054)
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQ29_MYXFH
Glutathione S-transferase, omega {ECO:0000313|EMBL:AKF10809.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_44781_26
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

29131..29610
-----------------
DNA (480bp)
protein (160aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZN82_DICPU
Putative uncharacterized protein {ECO:0000313|EMBL:EGC34604.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
GD18-4_B1_scaffold_44781_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

29613..30029
-----------------
DNA (417bp)
protein (139aa)
thioesterase id=24505314 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
thioesterase superfamily protein
Tax=RBG_16_RIF_WS3X_71_46_curated
GD18-4_B1_scaffold_44781_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30034..30783)
-----------------
DNA (750bp)
protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF07446.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_44781_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30889..31410)
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQZ0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90517.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_44781_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31452..32504)
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E624B
Uncharacterized protein {ECO:0000313|EMBL:EYF06971.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Glycosyl transferase, group 2 family protein
Displaying items 1-30 of 93 in total

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