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GD18-4_B1_scaffold_125333

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_125333_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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154..3921
-----------------
DNA (3768bp)
protein (1256aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GS37_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02887.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_125333_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4115..6028
-----------------
DNA (1914bp)
protein (638aa)
Chaperone protein DnaK n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9K4_SORC5
dnaK2; chaperone protein dnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_125333_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6570..6890
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05342.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_125333_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7120..7437)
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05342.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_125333_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7767..8492)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHP2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99525.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_125333_6
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8662..9162
-----------------
DNA (501bp)
protein (167aa)
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V391_9CYAN
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
GD18-4_B1_scaffold_125333_7
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9155..10384)
-----------------
DNA (1230bp)
protein (410aa)
Radical SAM protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QA98_METFO
Uncharacterized protein {ECO:0000313|EMBL:KIH77978.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
GD18-4_B1_scaffold_125333_8
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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comp(10336..11304)
-----------------
DNA (969bp)
protein (323aa)
Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0YG09_AURAN
Expressed protein {ECO:0000313|EMBL:EGB05809.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
hypothetical protein
GD18-4_B1_scaffold_125333_9
unknown

Not on your lists

comp(11530..11997)
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

GD18-4_B1_scaffold_125333_10
unknown

Not on your lists

12049..12273
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

GD18-4_B1_scaffold_125333_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12451..13833
-----------------
DNA (1383bp)
protein (461aa)
Putative outer membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8A4_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02250.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
outer membrane protein
GD18-4_B1_scaffold_125333_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13947..15251
-----------------
DNA (1305bp)
protein (435aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G147_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF07306.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_125333_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15548..16291
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBS9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08106.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_125333_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16335..17651
-----------------
DNA (1317bp)
protein (439aa)
Glycosyl hydrolases family 16 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099Y3_STIAD
glycosyl hydrolases family 16
Tax=CG_Delta_07
GD18-4_B1_scaffold_125333_15
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17652..20510)
-----------------
DNA (2859bp)
protein (953aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003476F40
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABW29297.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
GD18-4_B1_scaffold_125333_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20581..21330)
-----------------
DNA (750bp)
protein (250aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UC55_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AKF11687.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_125333_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21656..22726
-----------------
DNA (1071bp)
protein (357aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
tRNA-dihydrouridine synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUZ6_SORCE
hypothetical protein
GD18-4_B1_scaffold_125333_18
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22769..23347
-----------------
DNA (579bp)
protein (193aa)
Nuclease (SNase domain protein) n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2C9_GEOLS
nuclease
Nuclease (SNase domain protein) {ECO:0000313|EMBL:ACD94182.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
GD18-4_B1_scaffold_125333_19
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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23344..24378
-----------------
DNA (1035bp)
protein (345aa)
Ion transport 2 domain protein id=4316908 bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
ion transport 2 domain-containing protein
Tax=GWC2_Geobacteraceae_55_20_curated
GD18-4_B1_scaffold_125333_20
unknown

Not on your lists

comp(24486..24890)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

GD18-4_B1_scaffold_125333_21
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24890..25300)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036B96D9
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABU56145.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
GD18-4_B1_scaffold_125333_22

Not on your lists

comp(25552..26445)
-----------------
DNA (894bp)
protein (298aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=A9UKK2_9BACT
Lipase/esterase {ECO:0000313|EMBL:AAX37299.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase fold protein
GD18-4_B1_scaffold_125333_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26476..27678)
-----------------
DNA (1203bp)
protein (401aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B57AC0
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ83338.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
GD18-4_B1_scaffold_125333_24
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27733..28911)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein id=3500448 bin=GWF2_Lentisphaerae_57_35 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
GD18-4_B1_scaffold_125333_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29130..29813)
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF09357.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_125333_26

Not on your lists

29998..30762
-----------------
DNA (765bp)
protein (255aa)
seg 211..222 id=30795 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:EKD93559.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GD18-4_B1_scaffold_125333_27
unknown

Not on your lists

30750..31025
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

GD18-4_B1_scaffold_125333_28
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

31022..31651
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Microcystis sp. T1-4 RepID=I4I8N1_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:CCI30655.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
GD18-4_B1_scaffold_125333_29
unknown

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31651..32217
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

GD18-4_B1_scaffold_125333_30
unknown

Not on your lists

comp(32320..32502)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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