ggKbase home page

GD18-4_B1_scaffold_105584

Search features with annotation key words

Displaying items 31-60 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_105584_31
unknown

Not on your lists

26480..26893
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_32

Not on your lists

26893..27147
-----------------
DNA (255bp)
protein (85aa)
Putative Thioredoxin (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QMN1_9ZZZZ
Putative Thioredoxin (Modular protein) {ECO:0000313|EMBL:CBI08502.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
GD18-4_B1_scaffold_105584_33
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27412..28290
-----------------
DNA (879bp)
protein (293aa)
Anti-anti sigma factor protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EVT1_SORC5
anti-anti sigma factor protein
Anti-anti sigma factor protein {ECO:0000313|EMBL:CAN94254.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_105584_34
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28420..29088
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000365AA4F
polyisoprenoid-binding protein
Tax=RBG_16_Gamma2_60_9_curated
GD18-4_B1_scaffold_105584_35
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29375..29851)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMT4_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG74530.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_105584_36
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29848..31773)
-----------------
DNA (1926bp)
protein (642aa)
Glycoside hydrolase 15-related n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHL1_ANAD2
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ACL66723.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
GD18-4_B1_scaffold_105584_37
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31770..32669)
-----------------
DNA (900bp)
protein (300aa)
UPF0276 protein Anae109_1558 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=Y1558_ANADF
UPF0276 protein PSR1_00270 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
GD18-4_B1_scaffold_105584_38
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32677..32934)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPA3_ACCPU
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
GD18-4_B1_scaffold_105584_39
unknown

Not on your lists

33192..33455
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_40
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33571..34611)
-----------------
DNA (1041bp)
protein (347aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMZ6_SORCE
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:KFE62389.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Fis family transcriptional regulator
GD18-4_B1_scaffold_105584_41
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34784..35323)
-----------------
DNA (540bp)
protein (180aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAL1_ANADF
Copper chaperone CopZ {ECO:0000313|EMBL:GAO01511.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
GD18-4_B1_scaffold_105584_42
RLO_PLX_64_10, Bacteria

Not on your lists

comp(35333..35680)
-----------------
DNA (348bp)
protein (116aa)
Mercury transporter n=2 Tax=Pseudomonas aeruginosa RepID=U5AN52_PSEAI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GD18-4_B1_scaffold_105584_43
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

35905..36297
-----------------
DNA (393bp)
protein (131aa)
min:Minf_0451 Mercuric ion reductase, contains HMA domain; K00520 mercuric reductase [EC:1.16.1.1] id=1245624 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
merA2; mercuric reductase (EC:1.16.1.1)
Tax=RBG_16_Chloroflexi_52_11_curated
GD18-4_B1_scaffold_105584_44
unknown

Not on your lists

comp(36364..37842)
-----------------
DNA (1479bp)
protein (493aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_45
unknown

Not on your lists

comp(37850..39187)
-----------------
DNA (1338bp)
protein (446aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_46
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39289..39696
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT20_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY19156.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_105584_47
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

39776..42223
-----------------
DNA (2448bp)
protein (816aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U802_OCEP5
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
GD18-4_B1_scaffold_105584_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42377..44353
-----------------
DNA (1977bp)
protein (659aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H248_DENA2
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
GD18-4_B1_scaffold_105584_49
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44350..45720
-----------------
DNA (1371bp)
protein (457aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3M3_DESIS
sigma-54 factor interaction domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
GD18-4_B1_scaffold_105584_50
unknown

Not on your lists

46187..46381
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_51
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46433..47089
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN81_SORCE
ECF family RNA polymerase sigma factor
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_105584_52
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

47097..47327
-----------------
DNA (231bp)
protein (77aa)
Putative transmembrane anti-sigma factor n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAL4_ANADF
putative transmembrane anti-sigma factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
GD18-4_B1_scaffold_105584_53
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(47936..48262)
-----------------
DNA (327bp)
protein (109aa)
Hydrolase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TV01_9PLAN
Hydrolase {ECO:0000313|EMBL:EMI53022.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
GD18-4_B1_scaffold_105584_54
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(48274..48465)
-----------------
DNA (192bp)
protein (64aa)
Restriction endonuclease family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QFJ8_9CYAN
Restriction endonuclease family protein {ECO:0000313|EMBL:ERT06032.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
GD18-4_B1_scaffold_105584_55
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49273..49770
-----------------
DNA (498bp)
protein (166aa)
Putative bacteriophage related protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LLL3_HALO1
bacteriophage-like protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_105584_56
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49779..50939
-----------------
DNA (1161bp)
protein (387aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHB0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96436.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_105584_57
unknown

Not on your lists

51185..55849
-----------------
DNA (4665bp)
protein (1555aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_58
unknown

Not on your lists

55846..56832
-----------------
DNA (987bp)
protein (329aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_59
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57058..58146
-----------------
DNA (1089bp)
protein (363aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=B0RL97_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP49465.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
GD18-4_B1_scaffold_105584_60
unknown

Not on your lists

58165..59025
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

Displaying items 31-60 of 149 in total

View Taxonomy