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GD18-4_B1_scaffold_105584

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_105584_1
unknown

Not on your lists

comp(264..818)
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(993..2468)
-----------------
DNA (1476bp)
protein (492aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
GD18-4_B1_scaffold_105584_3
unknown

Not on your lists

comp(2563..3057)
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_4
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3258..3824)
-----------------
DNA (567bp)
protein (189aa)
Blue (Type 1) copper domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G2W9_CHLAD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACL23273.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
GD18-4_B1_scaffold_105584_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3834..4595)
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein id=3723646 bin=GWF2_Methylomirabilis_70_14 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
GD18-4_B1_scaffold_105584_6
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4643..5833)
-----------------
DNA (1191bp)
protein (397aa)
Cell surface protein {ECO:0000313|EMBL:AKB37164.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
cell surface protein
mba:Mbar_A2782 cell surface protein id=1242666 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
GD18-4_B1_scaffold_105584_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5830..6894)
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68093.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
GD18-4_B1_scaffold_105584_8
unknown

Not on your lists

comp(6910..8097)
-----------------
DNA (1188bp)
protein (396aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_9
unknown

Not on your lists

comp(8091..8303)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_10
unknown

Not on your lists

comp(8281..9003)
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_11

Not on your lists

9263..11005
-----------------
DNA (1743bp)
protein (581aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM80043.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PAS domain S-box id=4434375 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
zraS6; sensor protein
GD18-4_B1_scaffold_105584_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10998..12401
-----------------
DNA (1404bp)
protein (468aa)
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=14625085 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
two component sigma54 specific Fis family transcriptional regulator
Tax=CSP1_6_Rokubacteria
GD18-4_B1_scaffold_105584_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12411..13367)
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX03506.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein id=14431394 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
peptidase S41
GD18-4_B1_scaffold_105584_14
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(13400..14566)
-----------------
DNA (1167bp)
protein (389aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003675C15
Tax=RBG_16_Zixibacteria_53_22_curated
GD18-4_B1_scaffold_105584_15
unknown

Not on your lists

comp(14563..15018)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_16
unknown

Not on your lists

15312..15767
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_17
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15801..16181
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT20_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY19156.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_105584_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16249..16602
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4K7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39366.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_105584_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16637..17401
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1N7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39397.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_105584_20
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17415..18398)
-----------------
DNA (984bp)
protein (328aa)
arsM; arsenite S-adenosylmethyltransferase id=24515765 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter kilaueensis genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Methyltransferase type 11 {ECO:0000313|EMBL:KIF22056.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
methylase
GD18-4_B1_scaffold_105584_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(18438..19523)
-----------------
DNA (1086bp)
protein (362aa)
Putative Inorganic phosphate transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7N4_9BACT
putative inorganic phosphate transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
GD18-4_B1_scaffold_105584_22
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19539..20243
-----------------
DNA (705bp)
protein (235aa)
FHA domain containing protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKV0_HALO1
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ACY16670.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_105584_23
unknown

Not on your lists

comp(20245..20439)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_24
unknown

Not on your lists

comp(20504..20896)
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_25
RLO_PLX_64_10, Bacteria

Not on your lists

comp(21122..21532)
-----------------
DNA (411bp)
protein (137aa)
mercury transporter MerT n=1 Tax=Desulfovibrio longus RepID=UPI0003B755D3
heavy metal transport/detoxification protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
GD18-4_B1_scaffold_105584_26
unknown

Not on your lists

comp(21908..23212)
-----------------
DNA (1305bp)
protein (435aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23330..23887)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMQ2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33010.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_105584_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24468..25232
-----------------
DNA (765bp)
protein (255aa)
Putative uncharacterized protein n=1 Tax=Trichophyton tonsurans (strain CBS 112818) RepID=F2S220_TRIT1
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF03687.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_105584_29
unknown

Not on your lists

25609..25995
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

GD18-4_B1_scaffold_105584_30
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26029..26445
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Rhodococcus erythropolis DN1 RepID=T5I0M4_RHOER
Uncharacterized protein {ECO:0000313|EMBL:EQM30127.1}; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
regulatory protein, MerR
Displaying items 1-30 of 149 in total

View Taxonomy