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GD18-4_B1_scaffold_17526

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_17526_1
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(424..1038)
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378BB9
Uncharacterized protein {ECO:0000313|EMBL:EST36458.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
GD18-4_B1_scaffold_17526_2
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1179..2165
-----------------
DNA (987bp)
protein (329aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF05_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDY81369.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
GD18-4_B1_scaffold_17526_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2302..2820
-----------------
DNA (519bp)
protein (173aa)
Histidine triad (HIT) protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KX03_9ACTO
Histidine triad (HIT) protein {ECO:0000313|EMBL:CCH16100.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
histidine triad (hit) protein
GD18-4_B1_scaffold_17526_4
unknown

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comp(2830..3675)
-----------------
DNA (846bp)
protein (282aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3672..5711)
-----------------
DNA (2040bp)
protein (680aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8C3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95974.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_17526_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5951..7966
-----------------
DNA (2016bp)
protein (672aa)
Oligopeptidase A n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7D4_SORCE
oligopeptidase A
Oligopeptidase A {ECO:0000313|EMBL:AGP40321.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_17526_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7969..9048)
-----------------
DNA (1080bp)
protein (360aa)
Twitching motility protein PilT n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJF1_SORCE
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:CAN95486.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_17526_8
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9051..10826)
-----------------
DNA (1776bp)
protein (592aa)
Twitching motility protein PilT n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TY38_9DELT
Twitching motility protein PilT {ECO:0000313|EMBL:ERK87413.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
twitching motility protein
GD18-4_B1_scaffold_17526_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11013..12188)
-----------------
DNA (1176bp)
protein (392aa)
Lipid-transfer protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G6H8_9GAMM
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EYF08739.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
tioL; thiolase
GD18-4_B1_scaffold_17526_10
unknown

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12407..12988
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_11
unknown

Not on your lists

13102..13875
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13872..16595
-----------------
DNA (2724bp)
protein (908aa)
ATPase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037F05A4
ATPase, P-type (transporting), HAD superfamily, subfamily IC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
GD18-4_B1_scaffold_17526_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16617..17489)
-----------------
DNA (873bp)
protein (291aa)
NmrA family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHP7_ANADF
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ABS28243.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_17526_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17636..20512)
-----------------
DNA (2877bp)
protein (959aa)
Similar to eukaryotic hydroxysteroid (17-beta) dehydrogenase 4 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKF1_9GAMM
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EYF08740.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
eukaryotic hydroxysteroid (17-beta) dehydrogenase 4
GD18-4_B1_scaffold_17526_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20540..20644)
-----------------
DNA (105bp)
protein (35aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3ISF2_9PSED
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EYF08740.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_17526_16
unknown

Not on your lists

20795..21040
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21051..22556)
-----------------
DNA (1506bp)
protein (502aa)
Na(+)/H(+) antiporter NhaA 1 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=NHAA1_SORC5
nhaA1; Na+/H antiporter
Na(+)/H(+) antiporter NhaA 1 {ECO:0000255|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA 1 {ECO:0000255|HAMAP-Rule:MF_01844}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_17526_18
unknown

Not on your lists

comp(22665..23078)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_19

Not on your lists

comp(23122..25533)
-----------------
DNA (2412bp)
protein (804aa)
sensory box histidine kinase/response regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A63
Uncharacterized protein {ECO:0000313|EMBL:AHN97884.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
sensor protein
GD18-4_B1_scaffold_17526_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25694..27196)
-----------------
DNA (1503bp)
protein (501aa)
Putative secreted zinc protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F701_SORC5
zinc protease
Putative secreted zinc protease {ECO:0000313|EMBL:CAN91488.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_17526_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27193..28617)
-----------------
DNA (1425bp)
protein (475aa)
Putative zinc protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F705_SORC5
zinc protease
Putative zinc protease {ECO:0000313|EMBL:CAN91489.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_17526_22
unknown

Not on your lists

28686..29168
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_23
unknown

Not on your lists

comp(29366..29731)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_24
unknown

Not on your lists

29874..30317
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_25
unknown

Not on your lists

30314..30844
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

GD18-4_B1_scaffold_17526_26

Not on your lists

comp(31061..31843)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S40684 {ECO:0000313|EMBL:GAG45880.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GD18-4_B1_scaffold_17526_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32092..34596
-----------------
DNA (2505bp)
protein (835aa)
DEAD/DEAH box helicase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHE2_SORCE
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AGP32547.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_17526_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

34644..35501
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II82_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43418.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
GD18-4_B1_scaffold_17526_29
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35572..36105
-----------------
DNA (534bp)
protein (178aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D4J9_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:KFA94441.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
GD18-4_B1_scaffold_17526_30
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

36190..39690
-----------------
DNA (3501bp)
protein (1167aa)
protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE12_CHLTF
Serine/threonine protein kinase {ECO:0000313|EMBL:AEP11074.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Displaying items 1-30 of 67 in total

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