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GD18-4_B1_scaffold_12647

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_12647_1
unknown

Not on your lists

comp(1..141)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

GD18-4_B1_scaffold_12647_2

Not on your lists

436..918
-----------------
DNA (483bp)
protein (161aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BMA4_TERTT
Dihydrofolate reductase {ECO:0000313|EMBL:AIA18636.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GD18-4_B1_scaffold_12647_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

961..3723
-----------------
DNA (2763bp)
protein (921aa)
SpoVR family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJ11_ROSCS
SpoVR family protein
SpoVR family protein {ECO:0000313|EMBL:ABU57477.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
GD18-4_B1_scaffold_12647_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

3822..4688
-----------------
DNA (867bp)
protein (289aa)
PREDICTED: retinol dehydrogenase 11-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9EEF
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Chloroflexi_64_32_curated
GD18-4_B1_scaffold_12647_5
unknown

Not on your lists

4919..5176
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

GD18-4_B1_scaffold_12647_6
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5183..6775)
-----------------
DNA (1593bp)
protein (531aa)
Fibronectin type III domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA79_DESAA
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ACL03175.1}; Flags: Precursor;; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
GD18-4_B1_scaffold_12647_7
unknown

Not on your lists

6839..7339
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

GD18-4_B1_scaffold_12647_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7381..8469)
-----------------
DNA (1089bp)
protein (363aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQZ6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03752.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_12647_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..10296
-----------------
DNA (1758bp)
protein (586aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN92974.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN92974.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GB92_SORC5
GD18-4_B1_scaffold_12647_10
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10469..12208
-----------------
DNA (1740bp)
protein (580aa)
amy13I; alpha-amylase (EC:3.2.1.1)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Alpha-amylase, putative, amy13I n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDS3_CELJU
GD18-4_B1_scaffold_12647_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12234..15188
-----------------
DNA (2955bp)
protein (985aa)
cyclomaltodextrinase (EC:3.2.1.54)
Cyclomaltodextrinase (CDase) (Cyclomaltodextrin hydrolase, decycling) n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RDL6_PAEP6
Uncharacterized protein {ECO:0000313|EMBL:EYF02177.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_12647_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15222..16340
-----------------
DNA (1119bp)
protein (373aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG4_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CAM74621.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
methyl-accepting chemotaxis sensory transducer
GD18-4_B1_scaffold_12647_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16337..17611
-----------------
DNA (1275bp)
protein (425aa)
Glycine receptor, alpha 4 subunit n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG5_9PROT
Glycine receptor, alpha 4 subunit {ECO:0000313|EMBL:CAM74622.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
neurotransmitter-gated ion-channel ligand-binding protein
GD18-4_B1_scaffold_12647_14
unknown

Not on your lists

17630..17824
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

GD18-4_B1_scaffold_12647_15
unknown

Not on your lists

17914..18855
-----------------
DNA (942bp)
protein (314aa)

This feature has no annotations

GD18-4_B1_scaffold_12647_16
Theobroma cacao, Theobroma, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

18905..19312
-----------------
DNA (408bp)
protein (136aa)
PREDICTED: leucine-rich repeat extensin-like protein 4-like n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C37520
Proline extensin-like receptor kinase 1 {ECO:0000313|EMBL:EOY30784.1}; TaxID=3641 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.;" source="Theobroma cacao (Cacao) (Cocoa).;"
peptidase C14, caspase catalytic subunit p20
GD18-4_B1_scaffold_12647_17
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19309..20430
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWI9_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60811.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
GD18-4_B1_scaffold_12647_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20436..21275)
-----------------
DNA (840bp)
protein (280aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7U2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95907.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_12647_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21456..22943
-----------------
DNA (1488bp)
protein (496aa)
Transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7U5_SORC5
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CAN95908.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_12647_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

22956..23534
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GD41_9BACT id=1245673 bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
GD18-4_B1_scaffold_12647_21
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23562..25385)
-----------------
DNA (1824bp)
protein (608aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QR20_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX63744.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
GD18-4_B1_scaffold_12647_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25531..26718)
-----------------
DNA (1188bp)
protein (396aa)
hppD2; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC61_SORC5
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EYF04168.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_12647_23
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26861..27391
-----------------
DNA (531bp)
protein (177aa)
Metal-dependent phosphohydrolase HD sub domain n=2 Tax=Chloroflexus RepID=A9WHG6_CHLAA
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase HD sub domain {ECO:0000313|EMBL:ABY36292.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
GD18-4_B1_scaffold_12647_24
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(27459..28532)
-----------------
DNA (1074bp)
protein (358aa)
Uncharacterized protein n=1 Tax=Eimeria mitis RepID=U6KCE9_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ34456.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
GD18-4_B1_scaffold_12647_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28529..29830)
-----------------
DNA (1302bp)
protein (434aa)
PE-PGRS family protein n=1 Tax=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) RepID=E4UMU8_ARTGP
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF06650.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_12647_26
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29827..30996)
-----------------
DNA (1170bp)
protein (390aa)
OmpA domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8ML56_CORCM
oprF5; OmpA domain-containing protein
OmpA domain-containing protein {ECO:0000313|EMBL:AFE09704.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
GD18-4_B1_scaffold_12647_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31091..32269)
-----------------
DNA (1179bp)
protein (393aa)
VWA containing CoxE family protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ58_SORCE
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:AGP32763.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_12647_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32378..33433
-----------------
DNA (1056bp)
protein (352aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESY1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97429.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_12647_29
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(33440..34855)
-----------------
DNA (1416bp)
protein (472aa)
Sensor protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNJ9_STIAD
sensor protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
GD18-4_B1_scaffold_12647_30
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(34852..35427)
-----------------
DNA (576bp)
protein (192aa)
Putative transmembrane protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1T5_9BACT
transmembrane protein
Tax=RBG_13_Nitrospirae_43_8_curated
Displaying items 1-30 of 46 in total

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