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GD18-4_B1_scaffold_90633

Search features with annotation key words

Displaying items 31-60 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_90633_31
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30997..32235)
-----------------
DNA (1239bp)
protein (413aa)
Polysulfide reductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9S2_9PROT
Hydrogenase {ECO:0000313|EMBL:GAO34998.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
polysulfide reductase
GD18-4_B1_scaffold_90633_32
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32232..33260)
-----------------
DNA (1029bp)
protein (343aa)
Hydrogenase 2 protein HybA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ73_9PROT
hydrogenase 2 protein HybA
Tax=CG_Rhodocyc_01
GD18-4_B1_scaffold_90633_33
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33271..34365)
-----------------
DNA (1095bp)
protein (365aa)
Hydrogenase (NiFe) small subunit HydA n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A831_9PROT
Uptake hydrogenase small subunit {ECO:0000313|EMBL:KIM00301.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hupS; hydrogenase-1, ferredoxin hydrogenase, small chain
GD18-4_B1_scaffold_90633_34
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(34681..35529)
-----------------
DNA (849bp)
protein (283aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3R0_SORC5
SSU rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000313|EMBL:AKF08380.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_90633_35
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35526..37112)
-----------------
DNA (1587bp)
protein (529aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3Q6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94605.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_36
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37119..38120)
-----------------
DNA (1002bp)
protein (334aa)
Putative regulatory protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3Q2_SORC5
MoxR-like ATPase {ECO:0000313|EMBL:EYF05274.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
regulatory protein
GD18-4_B1_scaffold_90633_37
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38117..39472)
-----------------
DNA (1356bp)
protein (452aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3P8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94603.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_38
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39652..39819
-----------------
DNA (168bp)
protein (56aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FCT9_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE69329.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
GD18-4_B1_scaffold_90633_39
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39939..41708
-----------------
DNA (1770bp)
protein (590aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2Y0_DEIPD
glucose/sorbosone dehydrogenase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_90633_40
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41689..43425)
-----------------
DNA (1737bp)
protein (579aa)
(isocitrate dehydrogenase) kinase (EC:2.7.11.5)
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6S5_THIK1
Isocitrate dehydrogenase phosphatase {ECO:0000313|EMBL:AKF10791.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_90633_41
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43630..44997)
-----------------
DNA (1368bp)
protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7W3_GEOLS
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACD96536.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
GD18-4_B1_scaffold_90633_42
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44994..46931)
-----------------
DNA (1938bp)
protein (646aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HD96_ANADF
hypothetical protein
GD18-4_B1_scaffold_90633_43
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47123..48271
-----------------
DNA (1149bp)
protein (383aa)
Cytochrome c, class I n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQH1_ANADE
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABC81052.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
GD18-4_B1_scaffold_90633_44
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48397..49506
-----------------
DNA (1110bp)
protein (370aa)
Histidine kinase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYU8_DESAC
PAS domain S-box protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_90633_45
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

49482..50891
-----------------
DNA (1410bp)
protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3350116 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=GWC2_Nitrospirae_57_13_curated
GD18-4_B1_scaffold_90633_46
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51046..52323
-----------------
DNA (1278bp)
protein (426aa)
Response regulator receiver protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYU6_DESAC
Response regulator receiver protein {ECO:0000313|EMBL:EAT15319.1}; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
GD18-4_B1_scaffold_90633_47
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52423..53364)
-----------------
DNA (942bp)
protein (314aa)
Oxidoreductase n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HEX1_MYCMM
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:ACC41389.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
GD18-4_B1_scaffold_90633_48
unknown

Not on your lists

53487..54056
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_49
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54189..55484)
-----------------
DNA (1296bp)
protein (432aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCE2_ANADF
isocitrate dehydrogenase
GD18-4_B1_scaffold_90633_50
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55578..56381)
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6P2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA92386.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GD18-4_B1_scaffold_90633_51
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56378..57472)
-----------------
DNA (1095bp)
protein (365aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMX3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA92387.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GD18-4_B1_scaffold_90633_52
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57536..58345)
-----------------
DNA (810bp)
protein (270aa)
BioH protein, putative n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMR4_ANADE
BioH protein
BioH protein, putative {ECO:0000313|EMBL:ABC80096.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
GD18-4_B1_scaffold_90633_53
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58353..59804)
-----------------
DNA (1452bp)
protein (484aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDG4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFE62675.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
von Willebrand factor type A
GD18-4_B1_scaffold_90633_54
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60161..60658
-----------------
DNA (498bp)
protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VND1_POLNA
ElaA protein {ECO:0000313|EMBL:CDS49754.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
N-acetyltransferase GCN5
GD18-4_B1_scaffold_90633_55
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60655..61800
-----------------
DNA (1146bp)
protein (382aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FT40_9PSED
Radical SAM domain protein
Tax=CG_Mariprof_04
GD18-4_B1_scaffold_90633_56
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61782..62906)
-----------------
DNA (1125bp)
protein (375aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000365817B
acyltransferase family protein
Acyltransferase family protein {ECO:0000313|EMBL:AJY43102.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
GD18-4_B1_scaffold_90633_57
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62949..63782
-----------------
DNA (834bp)
protein (278aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_90633_58
unknown

Not on your lists

63864..64076
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_59
unknown

Not on your lists

64158..64355
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_60
unknown

Not on your lists

64384..64671
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

Displaying items 31-60 of 92 in total

View Taxonomy