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GD18-4_B1_scaffold_90633

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_90633_1
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121..741)
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V4N0_HALED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBV42968.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
GD18-4_B1_scaffold_90633_2
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(741..1298)
-----------------
DNA (558bp)
protein (186aa)
Glycine-rich protein n=3 Tax=Burkholderiaceae RepID=Q0K563_CUPNH
Glycine-rich protein {ECO:0000313|EMBL:CAJ94861.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
penicillin-binding protein
GD18-4_B1_scaffold_90633_3
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1318..2802)
-----------------
DNA (1485bp)
protein (495aa)
aromatic ring hydroxylase (EC:5.3.3.3 4.2.1.-)
Aromatic ring hydroxylase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C423_DESTA
Tax=BJP_IG2069_Syntrophobacterales_46_30
GD18-4_B1_scaffold_90633_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3138..4112)
-----------------
DNA (975bp)
protein (325aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F623_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN97858.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4238..5095)
-----------------
DNA (858bp)
protein (286aa)
Nitrate/nitrite ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQX6_SORC5
nrtD; nitrate/nitrite ABC transporter ATP-binding protein
Nitrate/nitrite ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAN94195.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5092..6114)
-----------------
DNA (1023bp)
protein (341aa)
Nitrate/nitrite ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQX9_SORC5
nrtC1; nitrate/nitrite ABC transporter ATP-binding protein
Nitrate/nitrite ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAN94196.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6686)
-----------------
DNA (573bp)
protein (191aa)
Nitrate/nitrite ABC transporter substrate-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQY4_SORC5
nrtA; nitrate/nitrite ABC transporter substrate-binding protein
Nitrate/nitrite ABC transporter substrate-binding protein {ECO:0000313|EMBL:CAN94198.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_90633_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7301..8443)
-----------------
DNA (1143bp)
protein (381aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I577_RHOVT
Uncharacterized protein {ECO:0000313|EMBL:KJC58255.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
GD18-4_B1_scaffold_90633_9
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8504..8809
-----------------
DNA (306bp)
protein (102aa)
Transcriptional regulator, XRE family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H7A7_ARTCA
Transcriptional regulator {ECO:0000313|EMBL:KGN32967.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
XRE family transcriptional regulator
GD18-4_B1_scaffold_90633_10
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

8806..9987
-----------------
DNA (1182bp)
protein (394aa)
HipA like protein id=4823726 bin=GWC2_ACD39_50_8 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
HipA N-terminal domain-containing protein
Tax=GWC2_ACD39_50_8_curated
GD18-4_B1_scaffold_90633_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10343..10885
-----------------
DNA (543bp)
protein (181aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXW7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF03752.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_90633_12
unknown

Not on your lists

11255..12682
-----------------
DNA (1428bp)
protein (476aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_13
unknown

Not on your lists

comp(12618..13316)
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

13753..14490
-----------------
DNA (738bp)
protein (246aa)
Tax=RBG_16_Acidobacteria_68_9_curated
GD18-4_B1_scaffold_90633_15
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..16135
-----------------
DNA (1644bp)
protein (548aa)
Putative gluconate 2-dehydrogenase flavoprotein {ECO:0000313|EMBL:EED30574.1}; EC=1.1.99.3 {ECO:0000313|EMBL:EED30574.1};; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
Putative gluconate 2-dehydrogenase flavoprotein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ55_9GAMM
glucose-methanol-choline oxidoreductase
GD18-4_B1_scaffold_90633_16
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

16132..16791
-----------------
DNA (660bp)
protein (220aa)
Tax=RBG_16_Acidobacteria_68_9_curated
GD18-4_B1_scaffold_90633_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16884..17855)
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF07602.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_90633_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17852..18970)
-----------------
DNA (1119bp)
protein (373aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YDH6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40863.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_90633_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18970..19812)
-----------------
DNA (843bp)
protein (281aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7M0_SORCE
hypothetical protein
GD18-4_B1_scaffold_90633_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20084..21043)
-----------------
DNA (960bp)
protein (320aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWH6_SORCE
hypothetical protein
GD18-4_B1_scaffold_90633_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21087..21476)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP18_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34927.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_90633_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21632..22915)
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRB6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34926.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_90633_23
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23087..24169
-----------------
DNA (1083bp)
protein (361aa)
Heat shock protein Hsp70 family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FK44_STIAD
heat shock protein 70
Heat shock protein Hsp70 family protein {ECO:0000313|EMBL:ADO74227.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
GD18-4_B1_scaffold_90633_24
unknown

Not on your lists

24713..25099
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_25
unknown

Not on your lists

comp(25198..25737)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_26
unknown

Not on your lists

comp(25909..26763)
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

GD18-4_B1_scaffold_90633_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26868..28067
-----------------
DNA (1200bp)
protein (400aa)
histidine kinase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003717489
Sensory box histidine kinase {ECO:0000313|EMBL:AKF05181.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
signal transduction histidine kinase
GD18-4_B1_scaffold_90633_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28139..28768
-----------------
DNA (630bp)
protein (210aa)
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:AKF05180.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Two component transcriptional regulator, LuxR family id=4401365 bin=GWC2_Spirochaete_52_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
LuxR family transcriptional regulator
GD18-4_B1_scaffold_90633_29
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28837..29292)
-----------------
DNA (456bp)
protein (152aa)
Hydrogenase 2 maturation protease {ECO:0000313|EMBL:KFB76866.1}; EC=3.4.23.- {ECO:0000313|EMBL:KFB76866.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Hydrogenase maturation protease n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPZ0_ACCPU
hydrogenase maturation protease
GD18-4_B1_scaffold_90633_30
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29282..30985)
-----------------
DNA (1704bp)
protein (568aa)
hybC; nickel-dependent hydrogenase large subunit (EC:1.12.99.6)
Nickel-dependent hydrogenase large subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFE7_9PROT
Hydrogenase 2 large subunit {ECO:0000313|EMBL:GAO34999.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Displaying items 1-30 of 92 in total

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