ggKbase home page

GD18-4_B1_scaffold_109355

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_109355_1
unknown

Not on your lists

comp(405..725)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_2
unknown

Not on your lists

901..1329
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_3
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1363..1827)
-----------------
DNA (465bp)
protein (155aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Bacterioferritin n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A383_METMM
bacterioferritin
GD18-4_B1_scaffold_109355_4
unknown

Not on your lists

1997..2506
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_5
unknown

Not on your lists

2590..2907
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2923..4032)
-----------------
DNA (1110bp)
protein (370aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05VE9_9SYNE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
GD18-4_B1_scaffold_109355_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4092..5642)
-----------------
DNA (1551bp)
protein (517aa)
Putative uncharacterized protein n=1 Tax=Trichophyton tonsurans (strain CBS 112818) RepID=F2S220_TRIT1
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF09337.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_109355_8

Not on your lists

6044..6811
-----------------
DNA (768bp)
protein (256aa)
Response regulator n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TS81_9DELT
Response regulator {ECO:0000313|EMBL:AHE14567.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator
GD18-4_B1_scaffold_109355_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6832..7641
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8S9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39263.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_109355_10
unknown

Not on your lists

7626..8228
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8271..10553
-----------------
DNA (2283bp)
protein (761aa)
xanthine dehydrogenase (EC:1.17.1.4)
Putative Xanthine dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBK9_SORC5
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:EYF08990.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_109355_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10553..11032
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBK7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96057.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_109355_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11029..11913
-----------------
DNA (885bp)
protein (295aa)
ygeT; xanthine dehydrogenase (EC:1.17.1.4)
Putative Xanthine dehydrogenase {ECO:0000313|EMBL:CAN96056.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CAN96056.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative Xanthine dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBK4_SORC5
GD18-4_B1_scaffold_109355_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12104..14455
-----------------
DNA (2352bp)
protein (784aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGE1_RHOMR
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_109355_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14452..15408
-----------------
DNA (957bp)
protein (319aa)
Glycosidase n=1 Tax=uncultured prokaryote RepID=H5SDS0_9ZZZZ
glycosidase-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_109355_16
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15410..15949)
-----------------
DNA (540bp)
protein (180aa)
Beta-lactamase domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2W7_GEOLS
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACD97227.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
GD18-4_B1_scaffold_109355_17
unknown

Not on your lists

comp(16492..16695)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_18
unknown

Not on your lists

16697..17290
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17291..18841)
-----------------
DNA (1551bp)
protein (517aa)
GatA2 protein {ECO:0000313|EMBL:CAN91907.1}; EC=3.1.5.- {ECO:0000313|EMBL:CAN91907.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GatA2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJ10_SORC5
gatA2; hypothetical protein
GD18-4_B1_scaffold_109355_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18997..19467
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05974.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_109355_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19451..20398)
-----------------
DNA (948bp)
protein (316aa)
rmlB2; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CAN96947.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CAN96947.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTH2_SORC5
GD18-4_B1_scaffold_109355_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20546..21709
-----------------
DNA (1164bp)
protein (388aa)
Phosphofructokinase-domain containing protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNI5_SORC5
phosphofructokinase-domain-containing protein
Phosphofructokinase-domain containing protein {ECO:0000313|EMBL:CAN93585.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_109355_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21697..22218)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003679B56
Uncharacterized protein {ECO:0000313|EMBL:AKF11726.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_109355_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22275..22880)
-----------------
DNA (606bp)
protein (202aa)
Regulatory protein TetR n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K0I7_9MYCO
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF09463.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
AcrR family transcriptional regulator
GD18-4_B1_scaffold_109355_25
Corynebacterium urealyticum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22952..23950
-----------------
DNA (999bp)
protein (333aa)
Putative Fe-S oxidoreductase n=1 Tax=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) RepID=B1VHX6_CORU7
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:CAQ05776.1}; TaxID=504474 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109).;"
GD18-4_B1_scaffold_109355_26
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24076..25326)
-----------------
DNA (1251bp)
protein (417aa)
B12 binding /radical SAM domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UP73_MYXSD
B12 binding/radical SAM domain-containing protein
B12 binding /radical SAM domain-containing protein {ECO:0000313|EMBL:AGC48314.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
GD18-4_B1_scaffold_109355_27
unknown

Not on your lists

25480..25776
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_28
unknown

Not on your lists

comp(25986..26267)
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

GD18-4_B1_scaffold_109355_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26264..27835)
-----------------
DNA (1572bp)
protein (524aa)
Tetratricopeptide repeat protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEZ7_SORC5
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:EYF07427.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_109355_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27888..28412
-----------------
DNA (525bp)
protein (175aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L040_THERP
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
molybdenum cofactor biosynthesis protein B
Displaying items 1-30 of 33 in total

View Taxonomy