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GD18-4_B1_scaffold_96252

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_96252_1
unknown

Not on your lists

comp(2..97)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_2
unknown

Not on your lists

comp(310..1062)
-----------------
DNA (753bp)
protein (251aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..3708)
-----------------
DNA (2601bp)
protein (867aa)
ATP dependent DNA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLH4_CORCM
DNA ligase {ECO:0000313|EMBL:KFA86926.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ligD; ATP dependent DNA ligase
GD18-4_B1_scaffold_96252_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3903..4874
-----------------
DNA (972bp)
protein (324aa)
Probable DNA repair protein Anae109_1008 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H921_ANADF
Ku family containing protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_96252_5
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4885..6051
-----------------
DNA (1167bp)
protein (389aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EU33_SORC5
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ62762.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
methylated-DNA--protein-cysteine methyltransferase
GD18-4_B1_scaffold_96252_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6179..10399
-----------------
DNA (4221bp)
protein (1407aa)
Tetratricopeptide repeat protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEZ7_SORC5
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CAN93080.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_96252_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..13103
-----------------
DNA (2592bp)
protein (864aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN93650.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93650.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRN8_SORC5
GD18-4_B1_scaffold_96252_8
unknown

Not on your lists

comp(13335..14231)
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14562..15926)
-----------------
DNA (1365bp)
protein (455aa)
Aldehyde dehydrogenase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEQ4_ANADF
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AHY48015.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
GD18-4_B1_scaffold_96252_10
unknown

Not on your lists

comp(15978..16316)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_11
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

comp(16335..17969)
-----------------
DNA (1635bp)
protein (545aa)
CoA-disulfide reductase / Disulfide bond regulator n=1 Tax=Caloramator australicus RC3 RepID=I7J6T6_9CLOT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=GWC2_OP9X_49_35_curated
GD18-4_B1_scaffold_96252_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18062..18943)
-----------------
DNA (882bp)
protein (294aa)
LysR family transcriptional regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJ92_MYXFH
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KFE64182.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
LysR family transcriptional regulator
GD18-4_B1_scaffold_96252_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19028..20143
-----------------
DNA (1116bp)
protein (372aa)
putative homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Putative Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:CBK42804.1}; EC=1.13.11.5 {ECO:0000313|EMBL:CBK42804.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EF7A9
GD18-4_B1_scaffold_96252_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20140..21249
-----------------
DNA (1110bp)
protein (370aa)
4-hydroxyphenylpyruvate dioxygenase n=3 Tax=Azotobacter vinelandii RepID=C1DLB4_AZOVD
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KFE64181.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hppD3; 4-hydroxyphenylpyruvate dioxygenase
GD18-4_B1_scaffold_96252_15
unknown

Not on your lists

comp(21210..21470)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_16
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21467..21709)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099X5_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU68527.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
hypothetical protein
GD18-4_B1_scaffold_96252_17
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(21797..22300)
-----------------
DNA (504bp)
protein (168aa)
DoxX family protein; K15977 putative oxidoreductase id=7718597 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
yphA; DoxX family protein
Tax=GWA1_Bdellovibrionales_52_35_curated
GD18-4_B1_scaffold_96252_18
unknown

Not on your lists

comp(22498..22866)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_19
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22901..23320)
-----------------
DNA (420bp)
protein (140aa)
ADP-ribose pyrophosphatase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000370109A
NUDIX hydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
GD18-4_B1_scaffold_96252_20
unknown

Not on your lists

comp(23454..23915)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

GD18-4_B1_scaffold_96252_21
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24015..24998
-----------------
DNA (984bp)
protein (328aa)
Cytochrome c oxidase, subunit II n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ81_NITHN
Cytochrome B561 {ECO:0000313|EMBL:KGM55203.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
cytochrome C oxidase subunit II
GD18-4_B1_scaffold_96252_22
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24995..27547
-----------------
DNA (2553bp)
protein (851aa)
cytochrome c oxidase (EC:1.9.3.1)
Cytochrome c oxidase n=2 Tax=Nitrosococcus oceani RepID=Q3JAA8_NITOC
Cytochrome B561 {ECO:0000313|EMBL:KFI19352.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
GD18-4_B1_scaffold_96252_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27547..27915
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0003192DC8
Uncharacterized protein {ECO:0000313|EMBL:EQM79385.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;"
membrane protein
GD18-4_B1_scaffold_96252_24
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27912..28553
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CEW6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL56770.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
signal peptide
GD18-4_B1_scaffold_96252_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28550..29617
-----------------
DNA (1068bp)
protein (356aa)
Cytochrome c, class I n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ85_NITHN
cytochrome C, class I
Putative cytochrome c-552 {ECO:0000313|EMBL:AKF04015.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_96252_26
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(29618..30625)
-----------------
DNA (1008bp)
protein (336aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDEB5
short chain dehydrogenase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
GD18-4_B1_scaffold_96252_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30859..32244
-----------------
DNA (1386bp)
protein (462aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRH9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF05833.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_96252_28
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32312..33667
-----------------
DNA (1356bp)
protein (452aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MK14_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03741.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
GD18-4_B1_scaffold_96252_29
unknown

Not on your lists

34047..34124
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

Displaying 29 items

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