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GD18-4_B1_scaffold_99396

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_99396_1
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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3..890
-----------------
DNA (888bp)
protein (296aa)
Putative fructokinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L290_THERP
PfkB domain-containing protein
Putative fructokinase {ECO:0000313|EMBL:ACM05408.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
GD18-4_B1_scaffold_99396_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

900..1247
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y942_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40851.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_99396_3
unknown

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comp(1302..2111)
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

GD18-4_B1_scaffold_99396_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2241..3815)
-----------------
DNA (1575bp)
protein (525aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH91_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96428.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3945..5528
-----------------
DNA (1584bp)
protein (528aa)
Anthranilate synthase, catalytic subunit n=2 Tax=Geobacter sulfurreducens RepID=D7AMK0_GEOSK
Anthranilate synthase, aminase component {ECO:0000313|EMBL:AKF05900.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
trpE; anthranilate synthase, catalytic subunit
GD18-4_B1_scaffold_99396_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..7495
-----------------
DNA (1722bp)
protein (574aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN91090.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN91090.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUD9_SORC5
GD18-4_B1_scaffold_99396_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7515..8063)
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUH5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF08754.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_99396_8
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8295..8564)
-----------------
DNA (270bp)
protein (90aa)
50S ribosomal protein L27 id=4106346 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
LSU ribosomal protein L27P
Tax=GWC2_Syntrophus_56_31_curated
GD18-4_B1_scaffold_99396_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8581..8889)
-----------------
DNA (309bp)
protein (103aa)
50S ribosomal protein L21 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL21_SORC5
LSU ribosomal protein L21p {ECO:0000313|EMBL:AKF03364.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
rplU; 50S ribosomal protein L21
GD18-4_B1_scaffold_99396_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9036..10283)
-----------------
DNA (1248bp)
protein (416aa)
Poly(L-lactic acid) depolymerase n=1 Tax=Streptomyces sp. AA4 RepID=D9UYY7_9ACTO
Poly(L-lactic acid) depolymerase {ECO:0000313|EMBL:EFL04363.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
peptidase s1 and s6 chymotrypsin/hap
GD18-4_B1_scaffold_99396_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10414..11283
-----------------
DNA (870bp)
protein (290aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD
protein of unknown function DUF178
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GD18-4_B1_scaffold_99396_12
unknown

Not on your lists

11378..12127
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

GD18-4_B1_scaffold_99396_13
Shimwellia blattae, Shimwellia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12229..13170
-----------------
DNA (942bp)
protein (314aa)
dihydrolipoamide acetyltransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037B9F01
FHA domain-containing protein
Putative uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AFJ48821.1}; TaxID=630626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shimwellia.;" source="Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC; 105725 / CDC 9005-74) (Escherichia blattae).;"
GD18-4_B1_scaffold_99396_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13370..13816
-----------------
DNA (447bp)
protein (149aa)
Rhodanese-like domain-containing protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRF0_SORC5
rhodanese-like domain-containing protein
Rhodanese-like domain-containing protein {ECO:0000313|EMBL:CAN90583.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13908..14900)
-----------------
DNA (993bp)
protein (331aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPN8_9SPHI
fumarylacetoacetate hydrolase
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:AHF14958.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GD18-4_B1_scaffold_99396_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15013..16314
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYL6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37569.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_99396_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16603..17997)
-----------------
DNA (1395bp)
protein (465aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NSJ1_9DELT
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EYF04781.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
GD18-4_B1_scaffold_99396_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17994..19247)
-----------------
DNA (1254bp)
protein (418aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCX1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40663.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_99396_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19314..20459
-----------------
DNA (1146bp)
protein (382aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSQ3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93813.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20459..21589
-----------------
DNA (1131bp)
protein (377aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AA359
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
GD18-4_B1_scaffold_99396_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21924..22412)
-----------------
DNA (489bp)
protein (163aa)
cAMP-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWP1_SORCE
cAMP-binding protein
cAMP-binding protein Probable transcriptional regulatory protein {ECO:0000313|EMBL:CAN94481.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22427..23374)
-----------------
DNA (948bp)
protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Thioredoxin reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM69_SORCE
thioredoxin reductase
GD18-4_B1_scaffold_99396_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23439..24407
-----------------
DNA (969bp)
protein (323aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
tRNA dimethylallyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9H3_SORCE
tRNA dimethylallyltransferase
GD18-4_B1_scaffold_99396_24
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(24414..26492)
-----------------
DNA (2079bp)
protein (693aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UL05_MYXSD
hypothetical protein
Tax=RBG_16_Armatimonadetes_58_9_curated
GD18-4_B1_scaffold_99396_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26568..28121
-----------------
DNA (1554bp)
protein (518aa)
Nitrogen regulation protein NR(I) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F1Z6_SORC5
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:EYF03692.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pilR2; nitrogen regulation protein NR(I)
GD18-4_B1_scaffold_99396_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28276..28833
-----------------
DNA (558bp)
protein (186aa)
Fimbrial protein pilA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F200_SORC5
pilA1; fimbrial protein pilA
Fimbrial protein pilA {ECO:0000313|EMBL:CAN94436.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28929..29471
-----------------
DNA (543bp)
protein (181aa)
Fimbiral protein pilA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F203_SORC5
Type IV pilin PilA {ECO:0000313|EMBL:EYF03690.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pilA2; fimbiral protein pilA
GD18-4_B1_scaffold_99396_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29540..30067
-----------------
DNA (528bp)
protein (176aa)
Fimbiral protein pilA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F203_SORC5
pilA2; fimbiral protein pilA
Fimbiral protein pilA {ECO:0000313|EMBL:CAN94437.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_99396_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30064..30537
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWL6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37607.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_99396_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30540..31478
-----------------
DNA (939bp)
protein (313aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3Y9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37608.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying items 1-30 of 32 in total

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