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GD18-4_B1_scaffold_162600

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_162600_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..119
-----------------
DNA (117bp)
protein (39aa)
(R)-methylmalonyl-CoA mutase, isobutyryl-CoA mutase-like catalytic subunit n=2 Tax=Geobacter metallireducens RepID=Q39QL0_GEOMG
(R)-methylmalonyl-CoA mutase, isobutyryl-CoA mutase-like catalytic subunit
(R)-methylmalonyl-CoA mutase, isobutyryl-CoA mutase-like catalytic subunit {ECO:0000313|EMBL:ABB33464.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
GD18-4_B1_scaffold_162600_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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637..2061
-----------------
DNA (1425bp)
protein (475aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHU6_ANADF
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
GD18-4_B1_scaffold_162600_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..3491
-----------------
DNA (1434bp)
protein (478aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHU5_ANADF
thiamine pyrophosphate binding domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_162600_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3542..4345
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y232_SORCE
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AKF10578.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_162600_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4305..5483)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJ11_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67610.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
GD18-4_B1_scaffold_162600_6
unknown

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5515..6393
-----------------
DNA (879bp)
protein (293aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6438..7118
-----------------
DNA (681bp)
protein (227aa)
Thiol disulfide oxidoreductase {ECO:0000313|EMBL:AKF03784.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_162600_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7120..7656
-----------------
DNA (537bp)
protein (179aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMP8_HALO1
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACY18735.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_162600_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7670..9595
-----------------
DNA (1926bp)
protein (642aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6T2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40539.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_162600_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9620..9895)
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQD4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93904.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_162600_11
unknown

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comp(10197..10757)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10811..13777)
-----------------
DNA (2967bp)
protein (989aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUK2_SORCE
General secretion pathway protein E {ECO:0000313|EMBL:AKF09042.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_162600_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14074..14757
-----------------
DNA (684bp)
protein (228aa)
lspA1; Signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Lipoprotein signal peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EPW3_SORC5
GD18-4_B1_scaffold_162600_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14798..15754
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXE5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37179.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_162600_15
unknown

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15751..16575
-----------------
DNA (825bp)
protein (275aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16624..17502
-----------------
DNA (879bp)
protein (293aa)
folD1; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=FOLD_SORC5
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_162600_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..17866
-----------------
DNA (372bp)
protein (124aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN96424.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN96424.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH81_SORC5
GD18-4_B1_scaffold_162600_18
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17863..18156
-----------------
DNA (294bp)
protein (98aa)
Serine/threonine protein kinase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1Z4_MYXXD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABF91572.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
GD18-4_B1_scaffold_162600_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18267..20024
-----------------
DNA (1758bp)
protein (586aa)
Endo-1,4-beta-xylanase A {ECO:0000313|EMBL:EYF07084.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
family 1 glycoside hydrolase6 id=3896101 bin=GWF2_Bacteroidetes_49_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
family 1 glycoside hydrolase6
GD18-4_B1_scaffold_162600_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20195..21100)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XT92_SORCE
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J {ECO:0000313|EMBL:EYF00877.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_162600_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21097..21900)
-----------------
DNA (804bp)
protein (268aa)
Partition protein, ParA homolog n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIR5_SORC5
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EYF00876.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
parA2; partition protein, ParA-like protein
GD18-4_B1_scaffold_162600_22
unknown

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22066..22254
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_23
unknown

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22304..22447
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22805..24082
-----------------
DNA (1278bp)
protein (426aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CAN93305.1}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CAN93305.1};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Trigger factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GIS1_SORC5
GD18-4_B1_scaffold_162600_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24451..25137
-----------------
DNA (687bp)
protein (229aa)
clpP2; endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIL8_SORCE
GD18-4_B1_scaffold_162600_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25405..26664
-----------------
DNA (1260bp)
protein (420aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKU0_SORCE
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ATP-dependent protease
GD18-4_B1_scaffold_162600_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(26698..27390)
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGE9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27756.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
GD18-4_B1_scaffold_162600_28
unknown

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comp(28100..28387)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

GD18-4_B1_scaffold_162600_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28527..31046
-----------------
DNA (2520bp)
protein (840aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Lon protease n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIL0_SORCE
peptidase
Displaying 29 items

View Taxonomy