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GD18-4_B1_scaffold_188600

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_188600_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1440
-----------------
DNA (1440bp)
protein (480aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
DNA polymerase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBZ5_SORCE
hypothetical protein
GD18-4_B1_scaffold_188600_2
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1700..2911
-----------------
DNA (1212bp)
protein (404aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMQ8_PSEME
beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:AJE13556.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
GD18-4_B1_scaffold_188600_3
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2919..4868
-----------------
DNA (1950bp)
protein (650aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000371AAD3
multidrug ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFH66211.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
GD18-4_B1_scaffold_188600_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4962..5531
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ20_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL58520.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
GD18-4_B1_scaffold_188600_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5553..5975)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP97_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34982.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(5975..7255)
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D129_9BACT
hypothetical protein
Tax=CG_Arma_02
GD18-4_B1_scaffold_188600_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7523..8998
-----------------
DNA (1476bp)
protein (492aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSP9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36936.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_8
unknown

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9152..9559
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_9
unknown

Not on your lists

comp(9572..9889)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10670..11458
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9M9_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL67417.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
GD18-4_B1_scaffold_188600_11
unknown

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comp(11710..11913)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_12
unknown

Not on your lists

comp(11910..12260)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_13
unknown

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12574..13323
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13846..15327
-----------------
DNA (1482bp)
protein (494aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSP6_SORC5
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:AKF10103.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_188600_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15456..16970
-----------------
DNA (1515bp)
protein (505aa)
RNA polymerase sigma-54 factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR18_SORCE
hypothetical protein
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17185..17553
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8A7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39108.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17733..18203
-----------------
DNA (471bp)
protein (157aa)
Nitrogen regulatory IIA protein homolog n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G803_SORC5
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:AKF07542.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
nitrogen regulatory IIA protein
GD18-4_B1_scaffold_188600_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18203..19285
-----------------
DNA (1083bp)
protein (361aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
HPr kinase/phosphorylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G800_SORC5
hprK; HPr kinase/phosphatase
GD18-4_B1_scaffold_188600_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19282..20382
-----------------
DNA (1101bp)
protein (367aa)
UPF0042 nucleotide-binding protein SCE1572_34250 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2T2_SORCE
nucleotide-binding protein
Nucleotide-binding protein SCE1572_34250 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..20663
-----------------
DNA (285bp)
protein (95aa)
Phosphocarrier protein HPr n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHS1_SORCE
phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:AGP32687.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20666..22039
-----------------
DNA (1374bp)
protein (458aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0T3_SORCE
hypothetical protein
GD18-4_B1_scaffold_188600_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21978..22589
-----------------
DNA (612bp)
protein (204aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0T3_SORCE
hypothetical protein
GD18-4_B1_scaffold_188600_23
unknown

Not on your lists

22985..24274
-----------------
DNA (1290bp)
protein (430aa)
trypsin-like serine protease with C-terminal PDZ domain
GD18-4_B1_scaffold_188600_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24411..25820
-----------------
DNA (1410bp)
protein (470aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FIF3_SORC5
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN91849.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_188600_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25850..26770)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9X2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37958.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_188600_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26770..27741)
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9X2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94812.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_188600_27
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27867..29018
-----------------
DNA (1152bp)
protein (384aa)
Cell wall surface anchor family protein n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3GCA6_ENTLS
Uncharacterised protein {ECO:0000313|EMBL:CRF20856.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
cell wall surface anchor family protein
GD18-4_B1_scaffold_188600_28
unknown

Not on your lists

29052..29978
-----------------
DNA (927bp)
protein (309aa)

This feature has no annotations

GD18-4_B1_scaffold_188600_29
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

29978..31738
-----------------
DNA (1761bp)
protein (587aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X1_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23604.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
GD18-4_B1_scaffold_188600_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31708..32754)
-----------------
DNA (1047bp)
protein (349aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6F2_SORCE
hypothetical protein
Displaying items 1-30 of 74 in total

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