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GD18-4_B1_scaffold_158454

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_158454_31
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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32491..33210
-----------------
DNA (720bp)
protein (240aa)
30S ribosomal protein S3 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMA3_SORCE
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33235..33651
-----------------
DNA (417bp)
protein (139aa)
50S ribosomal protein L16 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK28_SORCE
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_33
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33648..33893
-----------------
DNA (246bp)
protein (82aa)
50S ribosomal protein L29 n=2 Tax=Sorangium cellulosum RepID=RL29_SORC5
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
50S ribosomal protein L29
GD18-4_B1_scaffold_158454_34
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33896..34354
-----------------
DNA (459bp)
protein (153aa)
30S ribosomal protein S17 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YE98_SORCE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_158454_35
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


34367..34735
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQM4_SORCE
LSU ribosomal protein L14p (L23e) {ECO:0000313|EMBL:AKF10633.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
50S ribosomal protein L14
GD18-4_B1_scaffold_158454_36
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


34735..35010
-----------------
DNA (276bp)
protein (92aa)
50S ribosomal protein L24 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL24_SORC5
rplX; hypothetical protein
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_37
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


35077..35826
-----------------
DNA (750bp)
protein (250aa)
50S ribosomal protein L5 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIC8_SORCE
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
50S ribosomal protein L5
GD18-4_B1_scaffold_158454_38
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


35839..36024
-----------------
DNA (186bp)
protein (62aa)
Ribosomal protein S14, probable n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGH0_SORC5
30S ribosomal protein S14
Ribosomal protein S14, probable {ECO:0000313|EMBL:CAN98120.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_39
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36165..36560
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S8 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK90_SORCE
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_40
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36560..37165
-----------------
DNA (606bp)
protein (202aa)
50S ribosomal protein L6 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM99_SORCE
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_41
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37169..37528
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L18 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK22_SORCE
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_42
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37541..38122
-----------------
DNA (582bp)
protein (194aa)
30S ribosomal protein S5 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQL7_SORCE
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_43
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38122..38310
-----------------
DNA (189bp)
protein (63aa)
50S ribosomal protein L30 n=1 Tax=Salsuginibacillus kocurii RepID=UPI00037F26AD
Uncharacterized protein {ECO:0000313|EMBL:AKF10625.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
50S ribosomal protein L30
GD18-4_B1_scaffold_158454_44
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38303..38782
-----------------
DNA (480bp)
protein (160aa)
50S ribosomal protein L15 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGE7_SORC5
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_45
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38842..40101
-----------------
DNA (1260bp)
protein (420aa)
Protein translocase subunit SecY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK77_SORCE
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158454_46
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

40104..40730
-----------------
DNA (627bp)
protein (209aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
Adenylate kinase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA58_THEID
adenylate kinase
GD18-4_B1_scaffold_158454_47
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41296..41685
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S13 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RS13_SORC5
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_48
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41793..42197
-----------------
DNA (405bp)
protein (135aa)
30S ribosomal protein S11 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGC6_SORC5
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_49
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42317..42946
-----------------
DNA (630bp)
protein (210aa)
30S ribosomal protein S4 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGC2_SORC5
rpsD2; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CAN98107.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_50
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43242..44279
-----------------
DNA (1038bp)
protein (346aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIC2_SORCE
DNA-directed RNA polymerase subunit alpha
GD18-4_B1_scaffold_158454_51
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44433..44933
-----------------
DNA (501bp)
protein (167aa)
50S ribosomal protein L17 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL17_SORC5
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158454_52
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45052..46083
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1U7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM80137.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
GD18-4_B1_scaffold_158454_53
Fischerella sp. MV11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

46091..46600
-----------------
DNA (510bp)
protein (170aa)
shikimate kinase (EC:2.7.1.71)
Putative uncharacterized protein n=1 Tax=Fischerella sp. MV11 RepID=E1U3P1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:ACN96048.1}; TaxID=397321 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. MV11.;"
GD18-4_B1_scaffold_158454_54
Leptospira alexanderi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

46632..47408
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=1 Tax=Leptospira alexanderi serovar Manhao 3 str. L 60 RepID=V6IDZ9_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA62573.1}; TaxID=1049759 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira alexanderi serovar Manhao 3 str. L 60.;"
GD18-4_B1_scaffold_158454_55
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47953..49395
-----------------
DNA (1443bp)
protein (481aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037F71CB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ49241.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
GD18-4_B1_scaffold_158454_56
unknown

Not on your lists

49420..49806
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

GD18-4_B1_scaffold_158454_57
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(49864..51516)
-----------------
DNA (1653bp)
protein (551aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTE7_METTR
sensory transduction histidine kinase
Tax=RBG_16_Chloroflexi_50_9_curated
GD18-4_B1_scaffold_158454_58
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51953..52849
-----------------
DNA (897bp)
protein (299aa)
Putative uncharacterized protein id=4647659 bin=GWF2_Bacteroidetes_38_335 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
GD18-4_B1_scaffold_158454_59
unknown

Not on your lists

53186..53452
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

GD18-4_B1_scaffold_158454_60
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53449..54210
-----------------
DNA (762bp)
protein (254aa)
preprotein translocase subunit TatD n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B35B79
Uncharacterized protein {ECO:0000313|EMBL:KFN43953.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
deoxyribonuclease
Displaying items 31-60 of 77 in total

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