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GD18-4_B1_scaffold_219953

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_219953_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(354..869)
-----------------
DNA (516bp)
protein (172aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE32_ANADF
Peroxiredoxin {ECO:0000313|EMBL:KJE20166.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
alkyl hydroperoxide reductase
GD18-4_B1_scaffold_219953_2
unknown

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988..1710
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

GD18-4_B1_scaffold_219953_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1721..3529
-----------------
DNA (1809bp)
protein (603aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5G7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97803.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_4
unknown

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3771..4100
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

GD18-4_B1_scaffold_219953_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4108..5589
-----------------
DNA (1482bp)
protein (494aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ENR5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90891.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_trna_1
unknown

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5771..5844
-----------------
DNA (74bp)
transferRNA Met
GD18-4_B1_scaffold_219953_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5887..6627
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWK4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93942.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6635..7936
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX35_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37059.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_219953_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8004..10136)
-----------------
DNA (2133bp)
protein (711aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRC5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90572.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10133..11092)
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRC7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90573.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11140..13320)
-----------------
DNA (2181bp)
protein (727aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G170_SORC5
Putative serine-threonine protein kinase {ECO:0000313|EMBL:EYF04829.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_219953_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13383..15401
-----------------
DNA (2019bp)
protein (673aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Methionine--tRNA ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLJ7_SORC5
metG1; hypothetical protein
GD18-4_B1_scaffold_219953_12

Not on your lists

15403..15801
-----------------
DNA (399bp)
protein (133aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P0F2_CHRVO
Glyoxalase-like domain protein {ECO:0000313|EMBL:AIA11318.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
GD18-4_B1_scaffold_219953_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..18450
-----------------
DNA (2634bp)
protein (878aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSI4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93782.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_219953_14
unknown

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18447..18956
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

GD18-4_B1_scaffold_219953_15
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

18961..19701
-----------------
DNA (741bp)
protein (247aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRW4_TRURR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADI15292.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
GD18-4_B1_scaffold_219953_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19805..20233
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSZ8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35476.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_219953_17
unknown

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20287..21006
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

GD18-4_B1_scaffold_219953_18
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20991..22103)
-----------------
DNA (1113bp)
protein (371aa)
Multi-sensor signal transduction histidine kinase id=4403396 bin=GWA2__Bacteriovorax-rel_49_15 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
multi-sensor signal transduction histidine kinase
Tax=GWC2_Geobacteraceae_58_44_curated
GD18-4_B1_scaffold_219953_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(22154..22633)
-----------------
DNA (480bp)
protein (160aa)
PAS domain S-box id=4403397 bin=GWA2__Bacteriovorax-rel_49_15 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
putative PAS/PAC sensor protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying 20 items

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