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GD18-4_B1_scaffold_254457

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_254457_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

252..1442
-----------------
DNA (1191bp)
protein (397aa)
Radical SAM domain protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CEA1_9LEPT
radical SAM domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1427..2635
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NKM3_9GAMM
cytochrome d1, heme region
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2671..3690
-----------------
DNA (1020bp)
protein (340aa)
Transcriptional regulator, AsnC/Lrp family n=1 Tax=Leptonema illini DSM 21528 RepID=H2CE99_9LEPT
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3687..4520
-----------------
DNA (834bp)
protein (278aa)
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase id=4342181 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GD18-4_B1_scaffold_254457_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

4535..6841
-----------------
DNA (2307bp)
protein (769aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N6_ANADF
(NiFe) hydrogenase maturation protein HypF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6844..7101
-----------------
DNA (258bp)
protein (86aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N5_ANADF
hydrogenase assembly chaperone HypC/HupF
Hydrogenase assembly chaperone hypC/hupF {ECO:0000313|EMBL:ABS24731.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_254457_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7098..8222
-----------------
DNA (1125bp)
protein (375aa)
Hydrogenase formation HypD protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UBT5_ANASK
hydrogenase formation HypD protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8219..9232
-----------------
DNA (1014bp)
protein (338aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N3_ANADF
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ABS24729.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_254457_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

9249..9593
-----------------
DNA (345bp)
protein (115aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N2_ANADF
hydrogenase nickel incorporation protein HypA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

9586..10314
-----------------
DNA (729bp)
protein (243aa)
Hydrogenase accessory protein HypB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7N1_ANADF
hydrogenase nickel incorporation protein HypB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_254457_11
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10362..11018)
-----------------
DNA (657bp)
protein (219aa)
Hemolysin III family channel protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AXW3_9CLOT
Hemolysin III family channel protein {ECO:0000313|EMBL:EMZ32946.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hemolysin III family channel protein
GD18-4_B1_scaffold_254457_12
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11096..13534
-----------------
DNA (2439bp)
protein (813aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037BE16F
Tax=CG_Delta_07
GD18-4_B1_scaffold_254457_13
unknown

Not on your lists

comp(13548..14423)
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_14
unknown

Not on your lists

comp(14749..15189)
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_15
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15186..16826)
-----------------
DNA (1641bp)
protein (547aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DJV0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKB05994.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
hypothetical protein
GD18-4_B1_scaffold_254457_16
unknown

Not on your lists

comp(16868..17305)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17827..18099
-----------------
DNA (273bp)
protein (91aa)
id=12554033 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GD18-4_B1_scaffold_254457_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

18096..18473
-----------------
DNA (378bp)
protein (126aa)
PilT protein domain-containing protein id=12554032 bin=CNBR_ACIDO species=Actinomyces oris genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GD18-4_B1_scaffold_254457_19
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18513..19604
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P446_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP56611.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
GD18-4_B1_scaffold_254457_20
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19597..20799
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PMP3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33802.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
GD18-4_B1_scaffold_254457_21
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20796..21584
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PLG5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33801.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
GD18-4_B1_scaffold_254457_22
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(21642..22100)
-----------------
DNA (459bp)
protein (153aa)
NUDIX hydrolase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX14_TRURR
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADI14522.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
GD18-4_B1_scaffold_254457_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22150..22389)
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
GD18-4_B1_scaffold_254457_24
unknown

Not on your lists

22679..23575
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23572..24507
-----------------
DNA (936bp)
protein (312aa)
Putative lipoprotein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BZX9_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:EYF00365.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
putative lipoprotein
GD18-4_B1_scaffold_254457_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24516..25409)
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LM50_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY16756.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_254457_27
unknown

Not on your lists

25418..26302
-----------------
DNA (885bp)
protein (295aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_28
unknown

Not on your lists

comp(26328..26999)
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

GD18-4_B1_scaffold_254457_29
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27032..28204
-----------------
DNA (1173bp)
protein (391aa)
Beta-lactamase n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T4P9_9XANT
Beta-lactamase {ECO:0000313|EMBL:EFF48331.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
putative beta-lactamase protein
GD18-4_B1_scaffold_254457_30
unknown

Not on your lists

comp(28696..29562)
-----------------
DNA (867bp)
protein (289aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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