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GD18-4_B1_scaffold_323816

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_323816_1
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..975)
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQN2_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY13592.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_323816_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1400..2971)
-----------------
DNA (1572bp)
protein (524aa)
Serine/threonine protein kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QXU9_9DELT
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:AKF03034.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Ser/Thr protein kinase
GD18-4_B1_scaffold_323816_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3055..4434
-----------------
DNA (1380bp)
protein (460aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GPZ6_SORC5
sigma-54 dependent transcriptional regulator
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_323816_4
unknown

Not on your lists

4447..5667
-----------------
DNA (1221bp)
protein (407aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5787..6146
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G7_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43785.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
GD18-4_B1_scaffold_323816_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6213..7751)
-----------------
DNA (1539bp)
protein (513aa)
Putative phytoene dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYY0_SORC5
phytoene dehydrogenase
Putative phytoene dehydrogenase {ECO:0000313|EMBL:CAN98690.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_323816_7
unknown

Not on your lists

7813..8478
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_8
unknown

Not on your lists

8553..8930
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..11282)
-----------------
DNA (2343bp)
protein (781aa)
Beta-lactamase, putative n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZZ8_9PROT
Beta-lactamase, putative {ECO:0000313|EMBL:EGY01154.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hypothetical protein
GD18-4_B1_scaffold_323816_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11279..11920)
-----------------
DNA (642bp)
protein (214aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKJ9_SORCE
phosphoribosylglycinamide formyltransferase
GD18-4_B1_scaffold_323816_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11917..12984)
-----------------
DNA (1068bp)
protein (356aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=PUR5_SORC5
GD18-4_B1_scaffold_323816_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13366..16197)
-----------------
DNA (2832bp)
protein (944aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EPZ6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07988.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_323816_13
unknown

Not on your lists

16277..18976
-----------------
DNA (2700bp)
protein (900aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_14
unknown

Not on your lists

18933..19469
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_15
unknown

Not on your lists

comp(19773..20171)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_16
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..22156)
-----------------
DNA (1368bp)
protein (456aa)
MATE efflux family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWV9_9DELT
MATE efflux family protein {ECO:0000313|EMBL:EDM81783.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
MATE efflux family protein
GD18-4_B1_scaffold_323816_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22226..26413
-----------------
DNA (4188bp)
protein (1396aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UKM8_MYXSD
Putative lipoprotein {ECO:0000313|EMBL:AKF08997.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_323816_18
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26379..27500)
-----------------
DNA (1122bp)
protein (374aa)
PREDICTED: collagen alpha-1(I) chain-like isoform X2 n=1 Tax=Haplochromis burtoni RepID=UPI0003BC96CB
Uncharacterized protein {ECO:0000313|EMBL:EYR69258.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
GD18-4_B1_scaffold_323816_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27500..28444)
-----------------
DNA (945bp)
protein (315aa)
OmpA-like outer membrane domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4L0_SORC5
OmpA-like domain-containing protein
OmpA-like outer membrane domain protein {ECO:0000313|EMBL:CAN97720.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_323816_20
unknown

Not on your lists

comp(28720..33768)
-----------------
DNA (5049bp)
protein (1683aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33856..35970)
-----------------
DNA (2115bp)
protein (705aa)
OMP85 family outer membrane protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULE7_MYXSD
Outer membrane protein assembly factor YaeT {ECO:0000313|EMBL:EYF07139.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
OMP85 family outer membrane protein
GD18-4_B1_scaffold_323816_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36037..36603
-----------------
DNA (567bp)
protein (189aa)
Menaquinol-cytochrome c reductase, iron-sulfur subunit n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGF9_9DELT
Menaquinone-cytochrome C reductase iron-sulfur subunit protein {ECO:0000313|EMBL:KFE71441.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Rieske (2Fe-2S) domain-containing protein
GD18-4_B1_scaffold_323816_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36600..38462
-----------------
DNA (1863bp)
protein (621aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSG5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33528.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_323816_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38514..39548
-----------------
DNA (1035bp)
protein (345aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G976_9DELT
Sulfatase-modifying factor 1 (C-alpha-formyglycine-generating enzyme 1) {ECO:0000313|EMBL:EYF06190.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_323816_25
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39776..43033)
-----------------
DNA (3258bp)
protein (1086aa)
Putative lipoprotein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CFJ1_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:KFA91760.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative lipoprotein
GD18-4_B1_scaffold_323816_26
unknown

Not on your lists

comp(43292..43507)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

GD18-4_B1_scaffold_323816_27
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43504..44643)
-----------------
DNA (1140bp)
protein (380aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO30071.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
GD18-4_B1_scaffold_323816_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44705..46123
-----------------
DNA (1419bp)
protein (473aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XME6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33576.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_323816_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46349..47626)
-----------------
DNA (1278bp)
protein (426aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Alanine racemase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCL2_SORCE
alanine racemase
GD18-4_B1_scaffold_323816_30
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(47767..50430)
-----------------
DNA (2664bp)
protein (888aa)
CheA signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRN7_ROSCS
CheA signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Displaying items 1-30 of 64 in total

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