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GD18-4_B1_scaffold_288087

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_288087_1
unknown

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comp(1..855)
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

GD18-4_B1_scaffold_288087_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1088..2215
-----------------
DNA (1128bp)
protein (376aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN96844.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN96844.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ42_SORC5
GD18-4_B1_scaffold_288087_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2212..2952
-----------------
DNA (741bp)
protein (247aa)
Putative TetR-family transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GIR7_9DELT
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF03607.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TetR family transcriptional regulator
GD18-4_B1_scaffold_288087_4
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2957..3571
-----------------
DNA (615bp)
protein (205aa)
Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GRE8_STRC2
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_288087_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3590..5182)
-----------------
DNA (1593bp)
protein (531aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Glucose-6-phosphate isomerase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C6A9_MYXFH
GD18-4_B1_scaffold_288087_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5253..6218)
-----------------
DNA (966bp)
protein (322aa)
Hydroxymethylpyrimidine ABC transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P2G3_9DELT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFA88761.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ABC transporter substrate-binding protein
GD18-4_B1_scaffold_288087_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6238..6696)
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein id=4048099 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GD18-4_B1_scaffold_288087_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6987..7751)
-----------------
DNA (765bp)
protein (255aa)
ABC transporter, permease protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D8I0_MYXXD
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:ABF88847.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
GD18-4_B1_scaffold_288087_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7748..8623)
-----------------
DNA (876bp)
protein (292aa)
Putative sulfonate transport system ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2H9_SORC5
nrtC2; sulfonate ABC transporter ATP-binding protein
Putative sulfonate transport system ATP-binding protein {ECO:0000313|EMBL:CAN95651.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_288087_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8649..9503
-----------------
DNA (855bp)
protein (285aa)
Hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLB0_SORCE
Omega amidase {ECO:0000313|EMBL:EYF05260.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hydrolase
GD18-4_B1_scaffold_288087_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9507..11117
-----------------
DNA (1611bp)
protein (537aa)
DNA mismatch repair protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1Z1_SORCE
DNA mismatch repair protein
DNA mismatch repair protein {ECO:0000313|EMBL:AGP38471.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_288087_12
unknown

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comp(11124..12302)
-----------------
DNA (1179bp)
protein (393aa)

This feature has no annotations

GD18-4_B1_scaffold_288087_13
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12621..14555
-----------------
DNA (1935bp)
protein (645aa)
Papain family cysteine protease n=2 Tax=Clostridium carboxidivorans P7 RepID=D6M7X7_9CLOT
papain family cysteine protease
Papain family cysteine protease {ECO:0000313|EMBL:AKA69640.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
GD18-4_B1_scaffold_288087_14
unknown

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14552..14953
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

GD18-4_B1_scaffold_288087_15
unknown

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comp(14941..15648)
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

GD18-4_B1_scaffold_288087_16
unknown

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15803..16531
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

Displaying 16 items

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