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GD18-4_B1_scaffold_345594

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_345594_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(159..959)
-----------------
DNA (801bp)
protein (267aa)
Put. Acetylxylan esterase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTY0_SORC5
acetylxylan esterase
Put. Acetylxylan esterase {ECO:0000313|EMBL:CAN98576.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_345594_2
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(956..1393)
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E64
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFG38084.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
GD18-4_B1_scaffold_345594_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1528..3453
-----------------
DNA (1926bp)
protein (642aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YDD1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40823.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_345594_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3513..5699
-----------------
DNA (2187bp)
protein (729aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4W1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06479.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_345594_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5713..6423
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6J6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92702.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_345594_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6528..7802
-----------------
DNA (1275bp)
protein (425aa)
FliI/YscN family ATPase (EC:3.6.3.15)
ATPase, FliI/YscN family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JB66_ANAD2
Flagellum-specific ATP synthase FliI {ECO:0000313|EMBL:AKF11301.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_345594_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7813..8490)
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM84_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34297.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_345594_8
unknown

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comp(8635..9000)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9002..10408)
-----------------
DNA (1407bp)
protein (469aa)
gshA; glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000313|EMBL:CAN96064.1}; EC=6.3.2.2 {ECO:0000313|EMBL:CAN96064.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glutamate--cysteine ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBM5_SORC5
GD18-4_B1_scaffold_345594_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10472..11293)
-----------------
DNA (822bp)
protein (274aa)
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EYF08981.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_345594_11
unknown

Not on your lists

11399..11890
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_trna_1
unknown

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11920..11992
-----------------
DNA (73bp)
transferRNA Ala
GD18-4_B1_scaffold_345594_12
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12058..13053
-----------------
DNA (996bp)
protein (332aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) id=14626547 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
GD18-4_B1_scaffold_345594_13
unknown

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13050..14054
-----------------
DNA (1005bp)
protein (335aa)
patatin-like phospholipase
GD18-4_B1_scaffold_345594_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14137..16152
-----------------
DNA (2016bp)
protein (672aa)
Transketolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBJ2_GEOUR id=5224915 bin=16ft_combo_ws3_JS1 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Transketolase {ECO:0000313|EMBL:EYF07904.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
transketolase
GD18-4_B1_scaffold_345594_15
unknown

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16241..16798
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_16
unknown

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16823..17173
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17170..19107
-----------------
DNA (1938bp)
protein (646aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVB4_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:EHR69220.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
S8A family peptidase
GD18-4_B1_scaffold_345594_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19412..21262
-----------------
DNA (1851bp)
protein (617aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXH9_RUBXD
hypothetical protein
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
GD18-4_B1_scaffold_345594_19
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21278..22852)
-----------------
DNA (1575bp)
protein (525aa)
Multi-sensor hybrid histidine kinase (Fragment) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKG1_9DELT
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EDM73637.1}; Flags: Fragment;; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
PAS/PAC sensor hybrid histidine kinase
GD18-4_B1_scaffold_345594_20
unknown

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comp(22901..23905)
-----------------
DNA (1005bp)
protein (335aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23978..25657
-----------------
DNA (1680bp)
protein (560aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH93_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96429.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_345594_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25662..27197
-----------------
DNA (1536bp)
protein (512aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFM8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41688.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_345594_23
unknown

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27246..27956
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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28551..28868
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:CDM66612.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
GD18-4_B1_scaffold_345594_25
unknown

Not on your lists

comp(28912..29250)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29358..29618)
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP59_SORCE
Putative membrane protein {ECO:0000313|EMBL:EYF02631.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_345594_27
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

29842..30666
-----------------
DNA (825bp)
protein (275aa)
Putative uncharacterized protein n=3 Tax=Thermoanaerobacter RepID=G2MVV6_9THEO
hypothetical protein
Putative permease {ECO:0000313|EMBL:EIW00317.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
GD18-4_B1_scaffold_345594_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

30663..31076
-----------------
DNA (414bp)
protein (138aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFM9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89290.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
protein of unknown function DUF1634
GD18-4_B1_scaffold_345594_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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31118..31813
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZU2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36163.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying items 1-30 of 76 in total

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