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GD18-4_B1_scaffold_515021

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_515021_1
Plicaturopsis crispa, Plicaturopsis, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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comp(381..971)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein, partial n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B15E7
Unplaced genomic scaffold PLICRscaffold_23, whole genome shotgun sequence {ECO:0000313|EMBL:KII83530.1}; TaxID=944288 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricales incertae sedis; Plicaturopsis.;" source="Plicaturopsis crispa FD-325 SS-3.;"
hypothetical protein
GD18-4_B1_scaffold_515021_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(932..3169)
-----------------
DNA (2238bp)
protein (746aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWB2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36651.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_515021_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3232..4404)
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTN7_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF00633.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_515021_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4446..5216)
-----------------
DNA (771bp)
protein (257aa)
Transcriptional regulator, MerR family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTN8_HALO1
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:EYF00634.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
MerR family transcriptional regulator
GD18-4_B1_scaffold_515021_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5216..6421)
-----------------
DNA (1206bp)
protein (402aa)
Oxidoreductase FAD-binding domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTN9_HALO1
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:EYF00635.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
oxidoreductase FAD-binding domain-containing protein
GD18-4_B1_scaffold_515021_6
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6542..6877
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LV27_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY15868.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_515021_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6979..7509)
-----------------
DNA (531bp)
protein (177aa)
inorganic diphosphatase (EC:3.6.1.1)
Inorganic diphosphatase {ECO:0000313|EMBL:ABC83863.1}; EC=3.6.1.1 {ECO:0000313|EMBL:ABC83863.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Inorganic diphosphatase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IH03_ANADE
GD18-4_B1_scaffold_515021_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7607..9136)
-----------------
DNA (1530bp)
protein (510aa)
Putative efflux protein, MATE family n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2I0_OWEHD
Multi antimicrobial extrusion protein {ECO:0000313|EMBL:AKF09292.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
putative efflux protein, MATE family
GD18-4_B1_scaffold_515021_9
unknown

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comp(9217..9357)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

GD18-4_B1_scaffold_515021_10
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9461..9724)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G5N9_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ38612.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
GD18-4_B1_scaffold_515021_11
unknown

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comp(9725..10378)
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

GD18-4_B1_scaffold_515021_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10481..11149
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y791_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41302.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_515021_13
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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11139..11486
-----------------
DNA (348bp)
protein (116aa)
Carboxyl-terminal protease n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KAA8_CHLTE
ctpA-2; carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:AAM73473.1}; TaxID=194439 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
GD18-4_B1_scaffold_515021_14
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11539..12030
-----------------
DNA (492bp)
protein (164aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEJ7_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ82916.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
GD18-4_B1_scaffold_515021_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12111..13481)
-----------------
DNA (1371bp)
protein (457aa)
Biotin carboxylase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIX8_SORCE
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:EYF07997.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
biotin carboxylase
GD18-4_B1_scaffold_515021_16
unknown

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13806..15368
-----------------
DNA (1563bp)
protein (521aa)

This feature has no annotations

GD18-4_B1_scaffold_515021_17
unknown

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15439..15984
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

GD18-4_B1_scaffold_515021_18
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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16215..16481
-----------------
DNA (267bp)
protein (89aa)
Feruloyl esterase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X7B5_RHIFR
endonuclease DDE
Endonuclease DDE {ECO:0000313|EMBL:AJF70342.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
Displaying 18 items

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