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GD18-4_B1_scaffold_526164

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_526164_1
unknown

Not on your lists

1..225
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_2
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

546..1637
-----------------
DNA (1092bp)
protein (364aa)
Exopolyphosphatase-related protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF21_CHLTF
exopolyphosphatase-like protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_526164_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1709..4879
-----------------
DNA (3171bp)
protein (1057aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GU02_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02893.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_526164_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5473)
-----------------
DNA (594bp)
protein (198aa)
rimJ1; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:CAN90570.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CAN90570.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Alanine acetyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK74_SORCE
GD18-4_B1_scaffold_526164_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5470..9099)
-----------------
DNA (3630bp)
protein (1210aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN93096.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93096.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF34_SORC5
GD18-4_B1_scaffold_526164_6
unknown

Not on your lists

comp(9217..9540)
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9628..10662
-----------------
DNA (1035bp)
protein (345aa)
mRNA 3'-end processing factor n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RX08_XANCB
mRNA 3'-end processing factor
Strain LMCP11 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21194.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
GD18-4_B1_scaffold_526164_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10659..11282
-----------------
DNA (624bp)
protein (208aa)
DNA ligase I, ATP-dependent (dnl1); K01971 DNA ligase (ATP) [EC:6.5.1.1] id=24419640 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DNA ligase I, ATP-dependent (dnl1)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
GD18-4_B1_scaffold_526164_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

11290..12372
-----------------
DNA (1083bp)
protein (361aa)
Probable DNA ligase id=2876705 bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATP dependent DNA ligase
Tax=GWC2_RIF_CHLX_73_18_curated
GD18-4_B1_scaffold_526164_trna_1
unknown

Not on your lists

12478..12550
-----------------
DNA (73bp)
transferRNA Glu
GD18-4_B1_scaffold_526164_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12513..13550)
-----------------
DNA (1038bp)
protein (346aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHB0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96436.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_526164_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13781..14425
-----------------
DNA (645bp)
protein (215aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y129_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36618.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_526164_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14422..15621
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSR3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93817.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_526164_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..16624
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVU7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36619.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_526164_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16672..17970
-----------------
DNA (1299bp)
protein (433aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILJ6_ANADE
hypothetical protein
Tax=CG_Delta_07
GD18-4_B1_scaffold_526164_15
unknown

Not on your lists

17982..18833
-----------------
DNA (852bp)
protein (284aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18858..19310
-----------------
DNA (453bp)
protein (151aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FRK5_SORC5
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF08661.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_526164_17
unknown

Not on your lists

comp(19344..20597)
-----------------
DNA (1254bp)
protein (418aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_18
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20598..21392)
-----------------
DNA (795bp)
protein (265aa)
Tax=GWC2_Geobacteraceae_58_44_curated
GD18-4_B1_scaffold_526164_19
unknown

Not on your lists

comp(21389..23656)
-----------------
DNA (2268bp)
protein (756aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23677..25749)
-----------------
DNA (2073bp)
protein (691aa)
TonB-dependent receptor plug n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K1U7_STEMA
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEM51558.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
GD18-4_B1_scaffold_526164_21
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25751..26527)
-----------------
DNA (777bp)
protein (259aa)
TonB family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFM1_AZOSU
TonB family protein
TonB family protein {ECO:0000313|EMBL:AEV26087.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
GD18-4_B1_scaffold_526164_22
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26605..27702
-----------------
DNA (1098bp)
protein (366aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF14_9DELT
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_526164_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27814..28281)
-----------------
DNA (468bp)
protein (156aa)
Ferritin n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5S9_SORCE
ferritin
Ferritin {ECO:0000313|EMBL:AGP40164.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_526164_24
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28430..28927)
-----------------
DNA (498bp)
protein (166aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08SY2_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO70390.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU63590.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
GD18-4_B1_scaffold_526164_25
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28927..29385)
-----------------
DNA (459bp)
protein (153aa)
gamma-glutamyl cyclotransferase n=1 Tax=Myxococcus xanthus RepID=UPI00034C255E
hypothetical protein
Gamma-glutamyl cyclotransferase {ECO:0000313|EMBL:AKF85014.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
GD18-4_B1_scaffold_526164_26
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29382..30386)
-----------------
DNA (1005bp)
protein (335aa)
VrlE n=1 Tax=Myxococcus xanthus RepID=UPI000347AB90
VrlE {ECO:0000313|EMBL:ERK85245.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
GD18-4_B1_scaffold_526164_27
unknown

Not on your lists

30815..31678
-----------------
DNA (864bp)
protein (288aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_28
unknown

Not on your lists

31811..32509
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

GD18-4_B1_scaffold_526164_29
unknown

Not on your lists

32512..32955
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

Displaying items 1-30 of 67 in total

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