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GD18-4_B1_scaffold_538271

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_538271_1
unknown

Not on your lists

comp(697..1086)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

GD18-4_B1_scaffold_538271_2
unknown

Not on your lists

comp(1126..1530)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

GD18-4_B1_scaffold_538271_3
unknown

Not on your lists

1714..1950
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

GD18-4_B1_scaffold_538271_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1969..2376)
-----------------
DNA (408bp)
protein (136aa)
DoxD-like family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CF51_MYXFH
Quinol oxidase {ECO:0000313|EMBL:KFA89911.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
DoxD-like family protein
GD18-4_B1_scaffold_538271_5
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2379..2540)
-----------------
DNA (162bp)
protein (54aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RN01_ASTEC
GD18-4_B1_scaffold_538271_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3249..3605
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L19 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUY7_SORCE
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_538271_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3805..4437
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA83_SORC5
Kazal-type serine protease inhibitor domain protein {ECO:0000313|EMBL:AKF10183.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_538271_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4480..5832
-----------------
DNA (1353bp)
protein (451aa)
UPF0272 protein SCE1572_12415 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX95_SORCE
hypothetical protein
UPF0272 protein SCE1572_12415 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_538271_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5962..8961
-----------------
DNA (3000bp)
protein (1000aa)
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
glycine dehydrogenase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003479E39
GD18-4_B1_scaffold_538271_10
unknown

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8978..9451
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

GD18-4_B1_scaffold_538271_11
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9574..9990)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein id=128416 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=CG_Delta_06
GD18-4_B1_scaffold_538271_12
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10162..10914)
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQV1_SORC5
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
GD18-4_B1_scaffold_538271_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11179..11766
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPW8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35247.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_538271_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11763..12917
-----------------
DNA (1155bp)
protein (385aa)
gcvT1; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Aminomethyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQN1_SORC5
GD18-4_B1_scaffold_538271_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12963..13358
-----------------
DNA (396bp)
protein (132aa)
Glycine cleavage system H protein id=4543824 bin=GWC2_Methylomirabilis_70_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glycine cleavage system protein H
Tax=GWA2_Rokubacteria_70_23_curated
GD18-4_B1_scaffold_538271_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13480..13980)
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXW7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37339.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_538271_17
unknown

Not on your lists

14046..14201
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

GD18-4_B1_scaffold_538271_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..14974
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKN6_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71327.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_538271_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14979..15617)
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EV65_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91168.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_538271_trna_1
unknown

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15671..15743
-----------------
DNA (73bp)
transferRNA Ala
Displaying 20 items

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